ggKbase home page

13_1_40cm_2_scaffold_197

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_197_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..608
DNA (606bp) protein (202aa)
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZ17_9EURY
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:ERH09460.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
13_1_40cm_2_scaffold_197_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

605..1810
DNA (1206bp) protein (402aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC35_GEMAT
putative hydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
putative hydrolase
13_1_40cm_2_scaffold_197_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1850..2122)
DNA (273bp) protein (91aa)
Ferredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
ferredoxin Tax=GWC2_Gemmatimonadetes_71_10_curated
ferredoxin
13_1_40cm_2_scaffold_197_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2263..3309)
DNA (1047bp) protein (349aa)
Zn-dependent protease n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLI9_SINAD
Zn-dependent protease
Zn-dependent protease {ECO:0000313|EMBL:AGA30254.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidi
13_1_40cm_2_scaffold_197_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3320..4111)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN35_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30253.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
13_1_40cm_2_scaffold_197_6
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4318..4728
DNA (411bp) protein (137aa)
Bacterial regulatory s, tetR family protein n=1 Tax=Mycobacterium hassiacum DSM 44199 RepID=K5B9K3_9MYCO
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EKF25598.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
transcriptional regulator
13_1_40cm_2_scaffold_197_7
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

4725..5399
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTW0_SORCE
putative metal-dependent hydrolase Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
13_1_40cm_2_scaffold_197_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5411..6670)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA5_GEMAT
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG91469.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_197_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6682..8547)
DNA (1866bp) protein (622aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA6_GEMAT
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH39512.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
13_1_40cm_2_scaffold_197_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8616..9443)
DNA (828bp) protein (276aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA6_GEMAT
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH39512.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
13_1_40cm_2_scaffold_197_11
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9825..10988
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D695_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU79783.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
interphotoreceptor retinoid-binding protein
13_1_40cm_2_scaffold_197_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11022..12350)
DNA (1329bp) protein (443aa)
phosphomethylpyrimidine synthase n=1 Tax=Zavarzinella formosa RepID=UPI0002E9B6D5
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=GWC2_Gemmatimonadetes_71_10_curated
thiC; thiamine biosynthesis protein thiC
13_1_40cm_2_scaffold_197_13
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

Not on your lists

12577..13017
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24NJ7_DESHY
putative transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
hypothetical protein
13_1_40cm_2_scaffold_197_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13117..13665)
DNA (549bp) protein (183aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptide deformylase
Peptide deformylase id=4811764 bin=GWC2_Ignavibacteria_56_12 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_40cm_2_scaffold_197_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

13722..14333
DNA (612bp) protein (204aa)
Molybdenum hydroxylase accessory protein, YgfJ family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8E1_GEODF
uncharacterized MobA-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
molybdenum hydroxylase accessory protein, YgfJ family
13_1_40cm_2_scaffold_197_16
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

14480..15166
DNA (687bp) protein (229aa)
Putative transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC41_GEMAT
putative transcriptional regulator Tax=RBG_16_Acidobacteria_68_9_curated
putative transcriptional regulator
13_1_40cm_2_scaffold_197_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15163..16596
DNA (1434bp) protein (478aa)
Fe-S cluster assembly protein SufB n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZX02_MELRP
sufB; transport protein associated with Fe-S cluster assembly Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Fe-S cluster assembly protein SufB
13_1_40cm_2_scaffold_197_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16593..17384
DNA (792bp) protein (264aa)
FeS assembly ATPase SufC n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLD6_CHLTF
Iron-regulated ABC transporter ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FeS assembly ATPase SufC
13_1_40cm_2_scaffold_197_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17381..18688
DNA (1308bp) protein (436aa)
sufD; FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD Tax=RBG_16_Gemmatimonadetes_66_8_curated
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD id=14431317 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
FeS assembly protein SufD
13_1_40cm_2_scaffold_197_20
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18688..19917
DNA (1230bp) protein (410aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1590652 species="Bacteria; Firmic
csd; putative cysteine desulfurase (EC:2.8.1.7)
cysteine desulfurase n=1 Tax=Cohnella laeviribosi RepID=UPI00037D590C
13_1_40cm_2_scaffold_197_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19898..20347
DNA (450bp) protein (150aa)
NifU family iron-sulfur cluster assembly protein n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JQ50_HALH3
SUF system FeS assembly protein, NifU family
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:AHG89621.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_197_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20430..21380
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDA7F
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC transporter related protein
13_1_40cm_2_scaffold_197_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21373..22641
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344BF53
hypothetical membrane protein; K01992 ABC-2 type transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_197_24
unknown

Not on your lists

23014..23268
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_2_scaffold_197_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23277..25436
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88819.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 25 items

View Taxonomy