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13_1_40cm_2_scaffold_196

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_196_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..976
DNA (975bp) protein (325aa)
Glycosyl transferase group 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK52_NIAKG
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEV96486.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
13_1_40cm_2_scaffold_196_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1011..1616
DNA (606bp) protein (202aa)
id=12556190 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
id=12556190 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_2_scaffold_196_3
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1571..2365)
DNA (795bp) protein (265aa)
polysaccharide deacetylase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D19BD
putative xylanase/chitin deacetylase Tax=CG_Delta_03
polysaccharide deacetylase
13_1_40cm_2_scaffold_196_4
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2560..3504)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ7 RepID=UPI00036F282C
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADC73030.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalk
13_1_40cm_2_scaffold_196_5
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(3508..5052)
DNA (1545bp) protein (515aa)
polysaccharide biosynthesis protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4E86 id=5224946 bin=16ft_combo_ws3_JS1 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
polysaccharide biosynthesis protein Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
membrane protein involved in the export of O-antigen and teichoic acid
13_1_40cm_2_scaffold_196_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5060..5836)
DNA (777bp) protein (259aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Moorea producens 3L RepID=F4XV26_9CYAN
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
family 2 glycosyl transferase
13_1_40cm_2_scaffold_196_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5848..6750)
DNA (903bp) protein (301aa)
Glycosyl transferase family protein (Fragment) n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UGY6_MYCVA
glycosyl transferase family 2 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
glycosyl transferase family protein
13_1_40cm_2_scaffold_196_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6750..8360)
DNA (1611bp) protein (537aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_2_scaffold_196_9
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8357..9424)
DNA (1068bp) protein (356aa)
Putative glycosyl transferase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RBF8_CLAMS
glycosyl transferase
Putative glycosyl transferase {ECO:0000313|EMBL:CAQ01699.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. se
13_1_40cm_2_scaffold_196_10
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(9454..10686)
DNA (1233bp) protein (411aa)
Glycosyl transferase group 1 n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAI2_THEAQ rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EED09507.1}; TaxID=498848 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus aquaticus Y51MC23.;"
glycosyltransferase
13_1_40cm_2_scaffold_196_11
unknown

Not on your lists

comp(10683..12107)
DNA (1425bp) protein (475aa)

This feature has no annotations

13_1_40cm_2_scaffold_196_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(12104..12940)
DNA (837bp) protein (279aa)
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBB4_THET1
WecB/TagA/CpsF family glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
WecB/TagA/CpsF family glycosyl transferase
13_1_40cm_2_scaffold_196_13
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(12927..13934)
DNA (1008bp) protein (336aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBB5_THET1
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACZ42080.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_2_scaffold_196_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(13955..15388)
DNA (1434bp) protein (478aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037365BA
hypothetical protein
13_1_40cm_2_scaffold_196_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(15415..17055)
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003821F60
lipopolysaccharide biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
lipopolysaccharide biosynthesis protein
13_1_40cm_2_scaffold_196_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(17074..17796)
DNA (723bp) protein (241aa)
Polysaccharide export protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X6T2_ACISM
polysaccharide export protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
polysaccharide export protein
13_1_40cm_2_scaffold_196_17
unknown

Not on your lists

comp(18098..18367)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_2_scaffold_196_18
unknown

Not on your lists

comp(18412..18648)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_2_scaffold_196_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(18803..19921)
DNA (1119bp) protein (373aa)
two component sigma54 specific Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
sigma-54 dependent transcriptional regulator id=12557439 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative transcriptional regulatory protein ZraR
13_1_40cm_2_scaffold_196_20
unknown

Not on your lists

20532..20795
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_2_scaffold_196_21
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20766..20963)
DNA (198bp) protein (66aa)
regulatory protein MarR Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
regulatory protein MarR
13_1_40cm_2_scaffold_196_22
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20960..21373)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PNJ3_9ZZZZ
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP87298.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Displaying 22 items

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