ggKbase home page

13_1_40cm_2_scaffold_2068

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2068_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..564)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B3K0_HERA2
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
protein of unknown function DUF1211
13_1_40cm_2_scaffold_2068_2
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

785..1966
DNA (1182bp) protein (394aa)
gluconolactonase (EC:3.1.1.17)
Gluconolactonase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GA8_BRADU
Gluconolactonase {ECO:0000313|EMBL:EJZ30946.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-
13_1_40cm_2_scaffold_2068_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

2109..3131
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000376EF43
transcriptional regulator domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
adenylate cyclase
13_1_40cm_2_scaffold_2068_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

3362..4177
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QR9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88001.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_2_scaffold_2068_5
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4256..5239
DNA (984bp) protein (328aa)
Oxidoreductase domain-containing protein n=1 Tax=Rhodopirellula baltica SWK14 RepID=L7CIG0_RHOBT
NADH-dependent dehydrogenase Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
NADH-dependent dehydrogenase
13_1_40cm_2_scaffold_2068_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5259..5876
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Nocardiopsis chromatogenes RepID=UPI00034CAA31
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas met
putative haloacid dehalogenase-like hydrolase family protein
13_1_40cm_2_scaffold_2068_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

5876..6610
DNA (735bp) protein (245aa)
Uncharacterized protein involved in formate dehydrogenase formation n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AT3_SOLUE
formate dehydrogenase formation protein
Uncharacterized protein involved in formate dehydrogenase formation {ECO:0000313|EMBL:ABJ81833.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candida
13_1_40cm_2_scaffold_2068_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6754..7803
DNA (1050bp) protein (350aa)
Allantoinase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B6H2_STRRD
allantoinase
Allantoinase {ECO:0000313|EMBL:ACZ85736.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATC
13_1_40cm_2_scaffold_2068_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

7803..8384
DNA (582bp) protein (194aa)
formate dehydrogenase (EC:1.2.1.2)
Formate dehydrogenase {ECO:0000313|EMBL:ABJ81837.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABJ81837.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibact
Formate dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AS9_SOLUE
13_1_40cm_2_scaffold_2068_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8433..10919
DNA (2487bp) protein (829aa)
Formate dehydrogenase alpha subunit {ECO:0000313|EMBL:ABJ81836.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABJ81836.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacterace
formate dehydrogenase subunit alpha (EC:1.2.1.2)
Formate dehydrogenase alpha subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AT0_SOLUE
13_1_40cm_2_scaffold_2068_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11008..11922
DNA (915bp) protein (305aa)
Formate dehydrogenase (Quinone-dependent) iron-sulfur subunit {ECO:0000313|EMBL:ABF39872.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABF39872.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales;
Formate dehydrogenase (Quinone-dependent) iron-sulfur subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITC8_KORVE
formate dehydrogenase subunit beta
13_1_40cm_2_scaffold_2068_12
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

11919..13103
DNA (1185bp) protein (395aa)
Formate dehydrogenase gamma subunit n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DHT8_HYDTT
formate dehydrogenase subunit gamma
Formate dehydrogenase gamma subunit {ECO:0000313|EMBL:BAI69390.1}; TaxID=608538 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain
13_1_40cm_2_scaffold_2068_13
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13079..13534
DNA (456bp) protein (152aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Ar
beta-lactamase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B45356
beta-lactamase class D
13_1_40cm_2_scaffold_2068_14
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13534..14031
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAM97417.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
N-acetyltransferase GCN5
13_1_40cm_2_scaffold_2068_15
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14031..15740
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S5G3_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL44731.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
13_1_40cm_2_scaffold_2068_16
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15777..16028
DNA (252bp) protein (84aa)
putative peroxidase id=14624178 bin=bin5_DeltaP species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative peroxidase Tax=CSP1_8_Deltaproteobacteria
hypothetical protein
13_1_40cm_2_scaffold_2068_17
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16089..16373
DNA (285bp) protein (95aa)
peroxidase Tax=CSP1_8_Deltaproteobacteria
peroxidase id=14624179 bin=bin5_DeltaP species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative peroxidase
13_1_40cm_2_scaffold_2068_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

16370..17932
DNA (1563bp) protein (521aa)
Amidase (EC:3.5.1.4) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LC77_9BACL
amidase
13_1_40cm_2_scaffold_2068_19
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17979..18515
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M3T8_9BACL
nuclear export factor GLE1
Uncharacterized protein {ECO:0000313|EMBL:EST53286.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
13_1_40cm_2_scaffold_2068_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18540..19265
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000370E6DB
putative NADH-flavin reductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative flavin reductase
13_1_40cm_2_scaffold_2068_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19275..19817
DNA (543bp) protein (181aa)
Uncharacterized protein conserved in bacteria n=1 Tax=uncultured gamma proteobacterium HF4000_48E10 RepID=E7C8T9_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_2_scaffold_2068_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

19851..22025
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AED2_GEMAT rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
Displaying 22 items

View Taxonomy