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13_1_40cm_2_scaffold_210

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_210_1
unknown

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1..315
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_2_scaffold_210_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(312..950)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYP5_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_2_scaffold_210_3
RBG_16_Archaea_50_20_curated, Archaea

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967..2271
DNA (1305bp) protein (435aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=RBG_16_Archaea_50_20_curated
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparaginyl-tRNA synthetase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8T9_9ARCH
13_1_40cm_2_scaffold_210_4
Desulfurococcus fermentans, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(2747..3466)
DNA (720bp) protein (240aa)
Phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AFL66831.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AFL66831.1};; TaxID=768672 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcac
Phosphoglycerate dehydrogenase n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XSA7_9CREN
13_1_40cm_2_scaffold_210_5
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3693..4994)
DNA (1302bp) protein (434aa)
NAD(P)H-nitrite reductase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QD74_9FIRM
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:EKP94581.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Th
NADH oxidase (noxA-2)
13_1_40cm_2_scaffold_210_6
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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5254..5997
DNA (744bp) protein (248aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Thaumarchaeota_49_8_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QTX7_VULDI
13_1_40cm_2_scaffold_210_7
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

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6012..6935
DNA (924bp) protein (308aa)
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZD3_HALTV
inositol phosphatase/fructose-16-bisphosphatase
13_1_40cm_2_scaffold_210_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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6960..7655
DNA (696bp) protein (232aa)
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_13_Bathyarchaeota_46_16b_curated
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=3 Tax=Pyrococcus RepID=TPIS_PYRFU
13_1_40cm_2_scaffold_210_9
RBG_16_Archaea_50_20_curated, Archaea

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7678..8127
DNA (450bp) protein (150aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] id=24447693 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
Heme O oxygenase-like protein
13_1_40cm_2_scaffold_210_10
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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8236..8934
DNA (699bp) protein (233aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI000363D412
cytochrome C oxidase subunit II
13_1_40cm_2_scaffold_210_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9298..11346
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003758259
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:EJN58781.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum sa
heme/copper-type cytochrome/quinol oxidase subunit 1
13_1_40cm_2_scaffold_210_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11358..11630
DNA (273bp) protein (91aa)
Caa(3)-type oxidase, subunit IV {ECO:0000313|EMBL:ABS27063.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobac
13_1_40cm_2_scaffold_210_13
RBG_16_Archaea_50_20_curated, Archaea

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12436..13371
DNA (936bp) protein (312aa)
geranylgeranylglyceryl diphosphate synthase (EC:2.5.1.10 2.5.1.1 2.5.1.29); K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_16_Archaea_50_20_curated
Polyprenyl synthetase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67T18_SYMTH
polyprenyl synthetase
13_1_40cm_2_scaffold_210_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(13420..14307)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97A29_THEVO
transposase, IS605 OrfB family Tax=RBG_16_Thaumarchaeota_49_8_curated
transposase
13_1_40cm_2_scaffold_210_15
RBG_16_Archaea_50_20_curated, Archaea

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14748..15119
DNA (372bp) protein (124aa)
nuoA; NADH-quinone oxidoreductase subunit A (EC:1.6.99.5)
NADH-ubiquinone oxidoreductase, subunit A n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU02_9ARCH
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_210_16
RBG_16_Archaea_50_20_curated, Archaea

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15130..16140
DNA (1011bp) protein (337aa)
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U2_NITGG
13_1_40cm_2_scaffold_210_17
RBG_16_Archaea_50_20_curated, Archaea

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16148..16642
DNA (495bp) protein (165aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit J n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX3_NITGG
13_1_40cm_2_scaffold_210_18
RBG_16_Archaea_50_20_curated, Archaea

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16645..16953
DNA (309bp) protein (103aa)
ndhE; NAD(P)H-quinone oxidoreductase subunit 4L (EC:1.6.5.-)
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=14427491 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
NADH-ubiquinone oxidoreductase subunit 4L Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_210_19
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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16963..18480
DNA (1518bp) protein (506aa)
Proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU10_9ARCH
proton-translocating NADH-quinone oxidoreductase subunit M Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_2_scaffold_210_20
RBG_16_Archaea_50_20_curated, Archaea

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18477..20579
DNA (2103bp) protein (701aa)
nuoL; NADH-quinone oxidoreductase subunit L (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoL; NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit L n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U5_NITGG
13_1_40cm_2_scaffold_210_21
RBG_16_Archaea_50_20_curated, Archaea

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20581..22047
DNA (1467bp) protein (489aa)
nuoM; proton-translocating NAD(P)H-quinone oxidoreductase, chain M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
Proton-translocating NAD(P)H-quinone oxidoreductase, chain M id=3984446 bin=GWF2_OP3_43_52 species=unknown genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
NADH-ubiquinone oxidoreductase chain M
13_1_40cm_2_scaffold_210_22
RBG_16_Archaea_50_20_curated, Archaea

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22050..23510
DNA (1461bp) protein (487aa)
NADH-ubiquinone oxidoreductase subunit N (EC:1.6.5.3); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
nuoN; NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIZ0_NITGG
13_1_40cm_2_scaffold_210_23
unknown

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comp(23515..24120)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_40cm_2_scaffold_210_24
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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24234..24557
DNA (324bp) protein (108aa)
Archaeal/vacuolar-type H+-ATPase, subunit H n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JDS3_THEKO
Archaeal/vacuolar-type H+-ATPase, subunit H {ECO:0000313|EMBL:BAD85785.1}; TaxID=69014 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococc
hypothetical protein
13_1_40cm_2_scaffold_210_25
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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24559..25164
DNA (606bp) protein (202aa)
NtpE; V-type ATP synthase subunit E (EC:3.6.3.14)
V-type ATP synthase subunit E n=1 Tax=Thermococcus zilligii RepID=UPI00029A42A3
V-type ATP synthase subunit E; V-ATPase subunit E {ECO:0000255|HAMAP-Rule:MF_00311}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source=
13_1_40cm_2_scaffold_210_26
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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25176..27188
DNA (2013bp) protein (671aa)
V-type ATPase 116 kDa subunit; K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] Tax=RBG_13_Bathyarchaeota_38_9_curated
atpI2; V-type ATP synthase subunit I (EC:3.6.3.14)
V-type ATP synthase subunit I n=2 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRK3_CLOSH
13_1_40cm_2_scaffold_210_27
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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27178..27633
DNA (456bp) protein (152aa)
pco096443; LOC100285771; K03661 V-type H+-transporting ATPase 21kDa proteolipid subunit [EC:3.6.3.14] Tax=RBG_13_Bathyarchaeota_46_16b_curated
H+-or Na+-translocating f-type, v-type and A-type ATPase superfamily n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N576_MICPC
ATP synthase subunit c
13_1_40cm_2_scaffold_210_28
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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27644..28711
DNA (1068bp) protein (356aa)
V-type ATP synthase subunit C; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14]
V-type ATP synthase subunit C n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P6V5_METFA
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=573064 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Meth
13_1_40cm_2_scaffold_210_29
unknown

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29408..29947
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_40cm_2_scaffold_210_30
unknown

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comp(29820..30764)
DNA (945bp) protein (315aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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