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13_1_40cm_2_scaffold_2176

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2176_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3..1208
DNA (1206bp) protein (402aa)
amidohydrolase 3; K15358 enamidase [EC:3.5.2.18] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Amidohydrolase 3 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3H1_THERP
amidohydrolase 3
13_1_40cm_2_scaffold_2176_2
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

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1335..2240
DNA (906bp) protein (302aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TSW4_9CYAN
PDZ/DHR/GLGF domain-containing protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:AFY85640.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
13_1_40cm_2_scaffold_2176_3
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

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2237..2791
DNA (555bp) protein (185aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T4S2_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIF17228.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
trypsin-like serine protease with C-terminal PDZ domain
13_1_40cm_2_scaffold_2176_4
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2851..3450
DNA (600bp) protein (200aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XFM7_9CHRO
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AFZ30472.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocap
13_1_40cm_2_scaffold_2176_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3531..4766
DNA (1236bp) protein (412aa)
Secretion protein HlyD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR77_KORVE
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABF40623.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
13_1_40cm_2_scaffold_2176_6
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

4775..5500
DNA (726bp) protein (242aa)
ABC transporter, ATPase subunit; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RBG_13_Acidobacteria_68_16_curated
ABC transporter, ATPase subunit; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] id=17104021 bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
ABC transporter ATPase
13_1_40cm_2_scaffold_2176_7
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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5497..6636
DNA (1140bp) protein (380aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR79_KORVE rbh
ABC efflux pump, inner membrane subunit; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
efflux ABC transporter inner membrane protein
13_1_40cm_2_scaffold_2176_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

6638..7807
DNA (1170bp) protein (390aa)
ABC efflux pump, inner membrane subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
ABC efflux pump, inner membrane subunit id=17104023 bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
efflux ABC transporter inner membrane protein
13_1_40cm_2_scaffold_2176_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8067..9356
DNA (1290bp) protein (430aa)
HNH endonuclease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HNH endonuclease id=3261972 bin=GWA2_Methylomirabilis_73_35 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HNH endonuclease
13_1_40cm_2_scaffold_2176_10
unknown

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comp(9389..9604)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_2_scaffold_2176_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(9601..10446)
DNA (846bp) protein (282aa)
putative dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=1773285 bin=GWD2_Deltaproteobacteria_55_8 species=Pyrobaculum oguniense genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative dioxygenase
13_1_40cm_2_scaffold_2176_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10602..11351
DNA (750bp) protein (250aa)
Short-chain dehydrogenase id=2247805 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain alcohol dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
short-chain alcohol dehydrogenase
13_1_40cm_2_scaffold_2176_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11379..12464
DNA (1086bp) protein (362aa)
mdh2; malate dehydrogenase (EC:1.1.1.37) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
mdh2; malate dehydrogenase (EC:1.1.1.37)
malate dehydrogenase n=1 Tax=Cupriavidus sp. WS RepID=UPI000362D399
13_1_40cm_2_scaffold_2176_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12464..14911
DNA (2448bp) protein (816aa)
molybdopterin binding oxidoreductase large subunit; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] Tax=GWA2_Rokubacteria_70_23_curated
Molybdopterin binding oxidoreductase large subunit id=3729535 bin=GWF2_Methylomirabilis_70_14 species=Geobacillus kaustophilus genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein
13_1_40cm_2_scaffold_2176_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15042..15908
DNA (867bp) protein (289aa)
carbon-monoxide dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=GWA2_Rokubacteria_70_23_curated
carbon-monoxide dehydrogenase (EC:1.2.99.2)
Carbon-monoxide dehydrogenase id=4915855 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_1_40cm_2_scaffold_2176_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15901..16383
DNA (483bp) protein (161aa)
(2Fe-2S)-binding protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=GWA2_Rokubacteria_70_23_curated
(2Fe-2S)-binding protein id=3729541 bin=GWF2_Methylomirabilis_70_14 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
(2Fe-2S)-binding protein
13_1_40cm_2_scaffold_2176_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16516..16827)
DNA (312bp) protein (104aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_2176_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18129..18725
DNA (597bp) protein (199aa)
putative dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
Carbon monoxide dehydrogenase large chain id=2546027 bin=GWA2_Methylomirabilis_73_35 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_40cm_2_scaffold_2176_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18722..19276
DNA (555bp) protein (185aa)
fabG3; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
fabG3; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase id=3729548 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 19 items

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