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13_1_40cm_2_scaffold_223

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_223_1
unknown

Not on your lists

comp(555..1355)
DNA (801bp) protein (267aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_2
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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comp(1375..2622)
DNA (1248bp) protein (416aa)
UPF0272 protein Kcr_0480 n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L454_KORCO
hypothetical protein
UPF0272 protein Kcr_0480 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
13_1_40cm_2_scaffold_223_3
unknown

Not on your lists

2693..2962
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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3053..3661
DNA (609bp) protein (203aa)
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
13_1_40cm_2_scaffold_223_5
unknown

Not on your lists

comp(3871..4104)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(4243..4590)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T5A0_9EURY
Uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_223_7
unknown

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4654..5328
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_8
unknown

Not on your lists

comp(5289..5465)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_9
unknown

Not on your lists

comp(5413..5757)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5763..6563)
DNA (801bp) protein (267aa)
Putative RecA-superfamily ATPases implicated in signal transduction n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I8T9_METCZ
RecA-superfamily ATPase possibly involved in signal transduction
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:AIF84415.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae;
13_1_40cm_2_scaffold_223_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(6605..6901)
DNA (297bp) protein (99aa)
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_223_12
unknown

Not on your lists

comp(6898..7182)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_13
unknown

Not on your lists

7561..8016
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(8586..9644)
DNA (1059bp) protein (353aa)
Phosphate regulatory protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N322_9ARCH
phosphate regulatory protein Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate regulatory protein
13_1_40cm_2_scaffold_223_15
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9759..10106)
DNA (348bp) protein (116aa)
Thioredoxin n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMW2_METH6
Thioredoxin
Thioredoxin {ECO:0000313|EMBL:AET64527.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strai
13_1_40cm_2_scaffold_223_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10140..10343)
DNA (204bp) protein (68aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_223_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(10410..12584)
DNA (2175bp) protein (725aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TTA3_9ARCH
ATPase AAA Tax=RBG_16_Archaea_50_20_curated
ATPase AAA
13_1_40cm_2_scaffold_223_18
unknown

Not on your lists

comp(12685..13122)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_19
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13188..13460)
DNA (273bp) protein (91aa)
Elongation factor 1-beta n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=EF1B_STAMF
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=RBG_16_Bathyarchaeota_48_13_curated
ef1B; elongation factor 1-beta
13_1_40cm_2_scaffold_223_20
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(14611..15573)
DNA (963bp) protein (321aa)
DNA ligase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU
DNA ligase
DNA ligase, putative {ECO:0000313|EMBL:AAB89526.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (stra
13_1_40cm_2_scaffold_223_21
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(15570..16352)
DNA (783bp) protein (261aa)
Probable DNA repair protein AF_1726 n=2 Tax=Archaeoglobus fulgidus RepID=Y1726_ARCFU
hypothetical protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archae
13_1_40cm_2_scaffold_223_22
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16455..17375
DNA (921bp) protein (307aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KHZ7_9FIRM
DNA polymerase LigD, polymerase domain protein
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:AGL01267.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfo
13_1_40cm_2_scaffold_223_23
unknown

Not on your lists

comp(17556..17747)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_24
unknown

Not on your lists

18215..18664
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_2_scaffold_223_25
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(18736..20001)
DNA (1266bp) protein (422aa)
sodium/calcium exchanger membrane region; K07301 inner membrane protein Tax=RBG_16_Zixibacteria_43_9_curated
sodium/calcium exchanger membrane region; K07301 inner membrane protein id=14425893 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
sodium/calcium exchanger membrane region
13_1_40cm_2_scaffold_223_26
unknown

Not on your lists

comp(20120..20293)
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 26 items

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