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13_1_40cm_2_scaffold_2223

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2223_1
unknown

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2..106
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_2_scaffold_2223_2
RBG_16_NC10_65_8_curated, NC10, Bacteria

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153..581
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E626B3
hypothetical protein Tax=RBG_16_NC10_65_8_curated
hypothetical protein
13_1_40cm_2_scaffold_2223_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

787..1839
DNA (1053bp) protein (351aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64959.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_2_scaffold_2223_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1895..2476)
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:EAU68504.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
13_1_40cm_2_scaffold_2223_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2597..2938
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX9_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM64962.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_2_scaffold_2223_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3006..3701
DNA (696bp) protein (232aa)
Outer membrane lipoprotein-sorting protein {ECO:0000313|EMBL:CDM64963.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatog
13_1_40cm_2_scaffold_2223_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3869..4885
DNA (1017bp) protein (339aa)
Radical SAM domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F180_ACIC5
Predicted Fe-S oxidoreductase {ECO:0000313|EMBL:CDM64964.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
radical SAM domain-containing protein
13_1_40cm_2_scaffold_2223_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4947..5690)
DNA (744bp) protein (248aa)
TPR repeat {ECO:0000313|EMBL:CDM64042.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_2_scaffold_2223_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5687..7123)
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrino
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5S9D7_9BACT
13_1_40cm_2_scaffold_2223_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7237..7650)
DNA (414bp) protein (138aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCW7_GEOUR
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:CDM64046.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatog
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
13_1_40cm_2_scaffold_2223_11
unknown

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7721..7963
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_2_scaffold_2223_12
unknown

Not on your lists

7927..8169
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_2_scaffold_2223_13

Not on your lists

comp(8262..8999)
DNA (738bp) protein (246aa)
Crp n=1 Tax=uncultured organism RepID=K9LK17_9ZZZZ
Crp {ECO:0000313|EMBL:AFK83709.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
cAMP phosphodiesterase
13_1_40cm_2_scaffold_2223_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9249..10199
DNA (951bp) protein (317aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QBV3_9DELT
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDM64048.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas meth
response regulator receiver modulated diguanylate cyclase
13_1_40cm_2_scaffold_2223_15
unknown

Not on your lists

10141..10311
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_2_scaffold_2223_16

Not on your lists

10286..11254
DNA (969bp) protein (323aa)
PA2Cu1_2p n=1 Tax=uncultured organism RepID=K9LK72_9ZZZZ rbh
PA2Cu1_2p {ECO:0000313|EMBL:AFK83710.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
13_1_40cm_2_scaffold_2223_17

Not on your lists

comp(11408..11536)
DNA (129bp) protein (43aa)
Mtp {ECO:0000313|EMBL:AFK83711.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
13_1_40cm_2_scaffold_2223_18

Not on your lists

comp(11536..12369)
DNA (834bp) protein (278aa)
Mtp n=1 Tax=uncultured organism RepID=K9LLE1_9ZZZZ
Mtp {ECO:0000313|EMBL:AFK83711.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
peptidase M50
13_1_40cm_2_scaffold_2223_19

Not on your lists

comp(12472..12789)
DNA (318bp) protein (106aa)
IHF n=1 Tax=uncultured organism RepID=K9LKR5_9ZZZZ
IHF {ECO:0000313|EMBL:AFK83712.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
nucleoid DNA-binding protein
13_1_40cm_2_scaffold_2223_20

Not on your lists

13188..13907
DNA (720bp) protein (240aa)
SpdI n=1 Tax=uncultured organism RepID=K9LM45_9ZZZZ rbh
SpdI {ECO:0000313|EMBL:AFK83713.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
signal peptidase I type
13_1_40cm_2_scaffold_2223_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13978..15054
DNA (1077bp) protein (359aa)
PA2Cu1_7p n=1 Tax=uncultured organism RepID=K9LK75_9ZZZZ
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDM64067.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
Displaying 21 items

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