ggKbase home page

13_1_40cm_2_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_226_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

95..961
DNA (867bp) protein (289aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_2_scaffold_226_2
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(1037..2221)
DNA (1185bp) protein (395aa)
Citrate transporter n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EUM1_9ARCH
arsB; arsenical pump membrane protein Tax=RBG_16_Thaumarchaeota_49_8_curated
arsB; arsenical pump membrane protein
13_1_40cm_2_scaffold_226_3
unknown

Not on your lists

comp(2424..2810)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_2_scaffold_226_4
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

comp(3100..4527)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000368D086 rbh
peptidase dimerisation domain-containing protein Tax=RBG_13_Euryarchaeota_57_23_curated
peptidase dimerisation domain-containing protein
13_1_40cm_2_scaffold_226_5
unknown

Not on your lists

comp(4580..4912)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_2_scaffold_226_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4909..5679)
DNA (771bp) protein (257aa)
GCN5-related N-acetyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFS4_9CHLR
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EFH90557.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobac
hypothetical protein
13_1_40cm_2_scaffold_226_7
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

comp(5888..6400)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BLL6_THEXL
hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_2_scaffold_226_8
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6519..6989
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00036E1D68
transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:AIF84855.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="
13_1_40cm_2_scaffold_226_9
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

7058..8002
DNA (945bp) protein (315aa)
Antibiotic ABC transporter ATP-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5T7_9ARCH rbh
antibiotic ABC transporter ATP-binding protein
Antibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAJ47656.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus
13_1_40cm_2_scaffold_226_10
Picrophilus torridus, Picrophilus, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

8003..8854
DNA (852bp) protein (284aa)
Daunorubicin resistance ATP-binding protein DrrB n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L020_PICTO
daunorubicin resistance ATP-binding protein DrrB
Daunorubicin resistance ATP-binding protein DrrB {ECO:0000313|EMBL:AAT43682.1}; TaxID=263820 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Picrophilaceae; Picrophilus.;" source="
13_1_40cm_2_scaffold_226_11
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(8937..10094)
DNA (1158bp) protein (386aa)
threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RBG_16_Chloroflexi_51_16_curated
Threonine synthase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QS08_9CYAN
threonine synthase
13_1_40cm_2_scaffold_226_12
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

10269..10610
DNA (342bp) protein (114aa)
PadR family transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B740E8
transcriptional regulator, PadR-like family
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_52_12_curated
13_1_40cm_2_scaffold_226_13
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(10599..11171)
DNA (573bp) protein (191aa)
Putative hydrocarbon binding protein (Contains V4R domain) {ECO:0000313|EMBL:AGB04946.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-3
13_1_40cm_2_scaffold_226_14
Thermococcus cleftensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(11215..12591)
DNA (1377bp) protein (459aa)
zinc-dependent protease n=1 Tax=Thermococcus zilligii RepID=UPI00029AC6ED
zinc-dependent protease, TldD/PmbA family 1
Zinc-dependent protease, TldD/PmbA family 1 {ECO:0000313|EMBL:AFL96074.1}; TaxID=163003 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococ
13_1_40cm_2_scaffold_226_15
Desulfurococcus mucosus, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(12594..14021)
DNA (1428bp) protein (476aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) RepID=E8R9Z5_DESM0 rbh
peptidase U62 modulator of DNA gyrase
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:ADV65321.1}; TaxID=765177 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus.;" source="Desul
13_1_40cm_2_scaffold_226_16
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(14319..16460)
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KXB8_STRRC
putative hydrolase Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphoesterase
13_1_40cm_2_scaffold_226_17
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

17805..19124
DNA (1320bp) protein (440aa)
Hydrolase of the metallo-beta-lactamase superfamily n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXT5_9ARCH
metallo-beta-lactamase superfamily hydrolase Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein
13_1_40cm_2_scaffold_226_18
Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

19421..20230
DNA (810bp) protein (270aa)
Blue (Type1) copper domain-containing protein n=2 Tax=Nitrosopumilaceae RepID=K0B808_9ARCH
Blue (Type1) copper domain-containing protein
13_1_40cm_2_scaffold_226_19
unknown

Not on your lists

20778..21257
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_40cm_2_scaffold_226_20
unknown

Not on your lists

22078..22344
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_2_scaffold_226_21
unknown

Not on your lists

22378..22647
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_2_scaffold_226_22
unknown

Not on your lists

22996..23184
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_2_scaffold_226_23
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(24156..25241)
DNA (1086bp) protein (362aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
Thermophilic metalloprotease (M29) superfamily protein id=2106747 bin=GWB2_Chloroflexi_54_36 species=Clostridium bolteae genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
leucyl aminopeptidase (aminopeptidase T)
13_1_40cm_2_scaffold_226_24
unknown

Not on your lists

comp(25370..25591)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_2_scaffold_226_25
unknown

Not on your lists

comp(25599..25784)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_2_scaffold_226_26
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25827..26234
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000373E345
hypothetical protein
Strain NCTC 7096 contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIV58277.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneur
13_1_40cm_2_scaffold_226_27

Not on your lists

26432..27388
DNA (957bp) protein (319aa)
Putative integral membrane protein DUF6 n=1 Tax=uncultured marine microorganism HF4000_APKG8D23 RepID=B3TAI4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AIE92798.1}; TaxID=1457746 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote AD1000_28_C09.;"
hypothetical protein
13_1_40cm_2_scaffold_226_28
unknown

Not on your lists

27532..28083
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_2_scaffold_226_29
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28007..30559)
DNA (2553bp) protein (851aa)
PKD domain containing protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XAP9_CELAD
pkd domain containing protein
PKD domain containing protein {ECO:0000313|EMBL:ADV51011.1}; Flags: Precursor;; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" sour
13_1_40cm_2_scaffold_226_30
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

31412..32563
DNA (1152bp) protein (384aa)
Putative sodium/hydrogen exchange n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMX2_NITGG
putative Na+(Li+)/H+ antiporter
Putative Na+(Li+)/H+ antiporter {ECO:0000313|EMBL:AIC14430.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrosos
Displaying items 1-30 of 33 in total

View Taxonomy