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13_1_40cm_2_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_24_1
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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162..1160
DNA (999bp) protein (333aa)
Hydrogenase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPU2_THELI rbh
hydrogenase
Hydrogenase {ECO:0000313|EMBL:EHR77996.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850
13_1_40cm_2_scaffold_24_2
Thermoplasmatales archaeon A-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1152..2318)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI0003690C8A
Major facilitator transporter {ECO:0000313|EMBL:EQB70819.1}; TaxID=667135 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeo
resistance protein NorA
13_1_40cm_2_scaffold_24_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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2573..3544
DNA (972bp) protein (324aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI0003606425
hypothetical protein; K07022 Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_2_scaffold_24_4
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4484..6448)
DNA (1965bp) protein (655aa)
putative S9 family peptidase (EC:3.4.-.-)
Acylaminoacyl-peptidase n=1 Tax=Desmospora sp. 8437 RepID=F5SEA6_9BACL
Acylaminoacyl-peptidase {ECO:0000313|EMBL:EGK12565.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
13_1_40cm_2_scaffold_24_5
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(6476..6982)
DNA (507bp) protein (169aa)
ribose-5-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RBG_16_Bathyarchaeota_48_13_curated
Protein tyrosine phosphatase n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MR73_CALBD
protein tyrosine phosphatase
13_1_40cm_2_scaffold_24_6
RBG_16_Archaea_50_20_curated, Archaea

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7132..7719
DNA (588bp) protein (196aa)
30S ribosomal protein S7 n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BN40_HYPBU
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S7P
13_1_40cm_2_scaffold_24_7
unknown

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comp(7716..7982)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_2_scaffold_24_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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8109..10025
DNA (1917bp) protein (639aa)
UPI0003D1BEB0 related cluster n=1 Tax=unknown RepID=UPI0003D1BEB0
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_2_scaffold_24_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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9997..11919
DNA (1923bp) protein (641aa)
Putative uncharacterized protein n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YIQ1_METS5
hypothetical protein; K06915 Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_2_scaffold_24_10
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12050..12589)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LJ48_METBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ35632.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus
13_1_40cm_2_scaffold_24_trna_1
unknown

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comp(12810..12937)
DNA (128bp)
transferRNA
13_1_40cm_2_scaffold_24_11
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14268..15185)
DNA (918bp) protein (306aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XFI5_THEPJ
DNA polymerase LigD, polymerase domain-containing protein
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:ADG82406.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola
13_1_40cm_2_scaffold_24_12
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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15303..16085
DNA (783bp) protein (261aa)
Probable DNA repair protein AF_1726 n=2 Tax=Archaeoglobus fulgidus RepID=Y1726_ARCFU
hypothetical protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archae
13_1_40cm_2_scaffold_24_13
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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16082..17047
DNA (966bp) protein (322aa)
DNA ligase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU
DNA ligase
DNA ligase, putative {ECO:0000313|EMBL:AAB89526.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (stra
13_1_40cm_2_scaffold_24_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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17151..17339
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037CB871
Zn-ribbon RNA-binding protein; K07580 hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
Zn-ribbon RNA-binding protein
13_1_40cm_2_scaffold_24_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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17354..17623
DNA (270bp) protein (90aa)
Elongation factor 1-beta n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=EF1B_STAMF
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=RBG_16_Bathyarchaeota_48_13_curated
ef1B; elongation factor 1-beta
13_1_40cm_2_scaffold_24_16
unknown

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17696..18124
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_2_scaffold_24_17
RBG_16_Archaea_50_20_curated, Archaea

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18224..20398
DNA (2175bp) protein (725aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TTA3_9ARCH
ATPase AAA Tax=RBG_16_Archaea_50_20_curated
Cell division protein FtsH
13_1_40cm_2_scaffold_24_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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20430..20660
DNA (231bp) protein (77aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_24_19
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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20738..21040
DNA (303bp) protein (101aa)
Thioredoxin n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMW2_METH6
Thioredoxin
Thioredoxin {ECO:0000313|EMBL:AET64527.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strai
13_1_40cm_2_scaffold_24_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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21139..22236
DNA (1098bp) protein (366aa)
Phosphate regulatory protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N322_9ARCH
phosphate regulatory protein Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate regulatory protein
13_1_40cm_2_scaffold_24_21
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22553..23851
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARD4_9ARCH
TIGR00299 family protein
TIGR00299 family protein {ECO:0000313|EMBL:AIF84821.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nit
13_1_40cm_2_scaffold_24_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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23882..24607
DNA (726bp) protein (242aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_24_23
unknown

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comp(24635..24910)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_2_scaffold_24_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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25109..26776
DNA (1668bp) protein (556aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_2_scaffold_24_25
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

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comp(26806..27951)
DNA (1146bp) protein (382aa)
putative L-lysine 6-dehydrogenase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
putative L-lysine 6-dehydrogenase id=24580688 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative L-lysine 6-dehydrogenase
13_1_40cm_2_scaffold_24_26
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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28032..28610
DNA (579bp) protein (193aa)
Nucleoside-triphosphatase N186_06370 {ECO:0000256|HAMAP-Rule:MF_00796}; Short=NTPase {ECO:0000256|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000256|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phospho
Nucleoside-triphosphatase N186_06370 n=1 Tax=Thermofilum sp. 1910b RepID=S6A5T0_9CREN
putative NTPase
13_1_40cm_2_scaffold_24_27
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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28607..29272
DNA (666bp) protein (222aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=529709 species="Archaea; Euryarchaeota; Th
Ribonuclease HII n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AIQ2_PYRYC
ribonuclease HII
13_1_40cm_2_scaffold_24_28
unknown

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29416..29928
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_40cm_2_scaffold_24_29
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(29944..30480)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSB6_VULDI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN49509.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (s
Displaying items 1-30 of 50 in total

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