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13_1_40cm_2_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_238_trna_1
unknown

Not on your lists

23..95
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_238_1
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29..1417)
DNA (1389bp) protein (463aa)
RCC1 repeat-containing protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PHV1_9DELT
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
hypothetical protein
13_1_40cm_2_scaffold_238_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1431..1748)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MFB5_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE05834.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_1_40cm_2_scaffold_238_3
unknown

Not on your lists

comp(1780..2088)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_2_scaffold_238_4
unknown

Not on your lists

3355..3492
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_2_scaffold_238_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3489..4052
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM65_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62682.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
13_1_40cm_2_scaffold_238_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4203..5012)
DNA (810bp) protein (270aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7J7_GEODF
Multidrug transporter AcrB {ECO:0000313|EMBL:KFA90103.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source=
CzcA family heavy metal efflux pump
13_1_40cm_2_scaffold_238_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5043..5489
DNA (447bp) protein (149aa)
Magnesium and cobalt efflux protein corC n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L251_THERP
tlyC; Hemolysin TlyC Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_238_8
unknown

Not on your lists

comp(5363..6142)
DNA (780bp) protein (260aa)

This feature has no annotations

13_1_40cm_2_scaffold_238_9
unknown

Not on your lists

comp(6303..6590)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_2_scaffold_238_10
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(6587..8284)
DNA (1698bp) protein (566aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44) Tax=RBG_16_Chloroflexi_51_9_curated
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Variovorax sp. CF313 RepID=J2KHH5_9BURK
13_1_40cm_2_scaffold_238_11
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(8327..10096)
DNA (1770bp) protein (590aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44) Tax=RBG_16_Chloroflexi_51_9_curated
xenobiotic-transporting ATPase (EC:3.6.3.44)
Xenobiotic-transporting ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G770_ALIDK
13_1_40cm_2_scaffold_238_12
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10245..10586
DNA (342bp) protein (114aa)
Secreted protein corresponding to a gene involved in the response to chromate n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1L9X0_RALME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO54663.1}; Flags: Precursor;; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholde
13_1_40cm_2_scaffold_238_13
unknown

Not on your lists

10723..11241
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_40cm_2_scaffold_238_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11262..11621)
DNA (360bp) protein (120aa)
hypothetical protein id=14431417 bin=bin3_NC10 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
13_1_40cm_2_scaffold_238_15
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11591..12334)
DNA (744bp) protein (248aa)
ABC transporter ATP-binding protein, partial n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A052
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYT56508.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
ATPase
13_1_40cm_2_scaffold_238_16
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12331..13866)
DNA (1536bp) protein (512aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIG9_BEII9
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACB96122.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
13_1_40cm_2_scaffold_238_17
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13839..14828)
DNA (990bp) protein (330aa)
ABC transporter substrate binding component n=1 Tax=planctomycete KSU-1 RepID=I3II33_9PLAN
ABC transporter substrate binding component {ECO:0000313|EMBL:GAB61378.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete
extracellular solute-binding protein
13_1_40cm_2_scaffold_238_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14876..15307)
DNA (432bp) protein (144aa)
hypothetical protein id=14430827 bin=bin3_NC10 species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_2_scaffold_238_19
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15304..16431)
DNA (1128bp) protein (376aa)
chrA; chromate resistance protein a; K07240 chromate transporter Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
chromate transporter, chromate ion transporter (CHR) family
chrA; Chromate transport protein ChrA id=14626822 bin=bin7_NC10_sister species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_238_20
unknown

Not on your lists

16775..17209
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_2_scaffold_238_21

Not on your lists

comp(17176..17472)
DNA (297bp) protein (99aa)
YVTN beta-propeller repeat-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Y3X0_9ZZZZ
YVTN beta-propeller repeat-containing protein {ECO:0000313|EMBL:EQD27748.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainag
13_1_40cm_2_scaffold_238_22
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18273..19274
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C049_DESTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM22940.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile t
13_1_40cm_2_scaffold_238_23
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

19271..19915
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQI5_9PLAN
hypothetical protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein
13_1_40cm_2_scaffold_238_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19923..20516
DNA (594bp) protein (198aa)
chrC; Superoxide dismutase [Fe] (EC:1.15.1.1)
Manganese and iron superoxide dismutase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9R4_9GAMM
Manganese and iron superoxide dismutase {ECO:0000313|EMBL:EIL96205.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
13_1_40cm_2_scaffold_238_25
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20513..21349
DNA (837bp) protein (279aa)
LppY/LpqO family protein n=2 Tax=Myxococcus xanthus RepID=Q1DBF3_MYXXD
LppY/LpqO family protein
LppY/LpqO family protein {ECO:0000313|EMBL:ABF89564.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_2_scaffold_238_26
unknown

Not on your lists

comp(21346..21765)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_2_scaffold_238_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21969..22406
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM65_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62682.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
13_1_40cm_2_scaffold_238_28
unknown

Not on your lists

comp(22462..22950)
DNA (489bp) protein (163aa)

This feature has no annotations

13_1_40cm_2_scaffold_238_29
unknown

Not on your lists

23228..23506
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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