ggKbase home page

13_1_40cm_2_scaffold_2567

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2567_1
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(42..698)
DNA (657bp) protein (219aa)
hypothetical protein Tax=RBG_13_Chloroflexi_57_8_curated
Putative uncharacterized protein id=3122155 bin=GWC2_Elusimicrobia_64_44 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
13_1_40cm_2_scaffold_2567_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(652..2025)
DNA (1374bp) protein (458aa)
putative two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
atm:ANT_22650 two-component sensor histidine kinase id=1247872 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
two-component sensor histidine kinase
13_1_40cm_2_scaffold_2567_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2029..2706)
DNA (678bp) protein (226aa)
putative OmpR family two-component response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative OmpR family two-component response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=14628653 bin=bin8_Chloro species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
putative OmpR family two-component response regulator
13_1_40cm_2_scaffold_2567_4
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

2742..3635
DNA (894bp) protein (298aa)
putative deacetylase Tax=RBG_13_Chloroflexi_66_10_curated
LmbE family protein id=1821669 bin=GWB2_Chloroflexi_54_36 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
LmbE family protein
13_1_40cm_2_scaffold_2567_5
unknown

Not on your lists

comp(3544..4296)
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_40cm_2_scaffold_2567_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

4388..5419
DNA (1032bp) protein (344aa)
sugar isomerase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RBG_16_Chloroflexi_63_12_curated
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
id=14628600 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
13_1_40cm_2_scaffold_2567_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5313..5747)
DNA (435bp) protein (145aa)
Transcriptional regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z099_9PROT
transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_2_scaffold_2567_8
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5801..6763)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI00036E359B
hypothetical protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
hypothetical protein
13_1_40cm_2_scaffold_2567_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6756..7742)
DNA (987bp) protein (329aa)
hypothetical protein; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] id=24488492 bin=RBG_19FT_COMBO_GAL15_69_19 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_2_scaffold_2567_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7739..8494)
DNA (756bp) protein (252aa)
UPF0249 protein GYMC61_2136 n=4 Tax=Geobacillus RepID=C9S0Y2_GEOSY
hypothetical protein; K03478 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_2_scaffold_2567_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8491..9342)
DNA (852bp) protein (284aa)
murQ; N-acetylmuramic acid-6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PMW4_9FIRM
RpiR family transcriptional regulator
13_1_40cm_2_scaffold_2567_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9339..10247)
DNA (909bp) protein (303aa)
ATPase BadF/BadG/BcrA/BcrD type n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4J8_THERP
putative N-acetylglucosamine kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
BadF/BadG/BcrA/BcrD type ATPase
13_1_40cm_2_scaffold_2567_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10247..11335)
DNA (1089bp) protein (363aa)
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NVP6_GRAMM
molecular chaperone Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_2_scaffold_2567_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11347..12411)
DNA (1065bp) protein (355aa)
Carboxylesterase, beta-lactamase family n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JQP4_SYNJA
carboxylesterase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
carboxylesterase
13_1_40cm_2_scaffold_2567_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12444..13919)
DNA (1476bp) protein (492aa)
beta-N-acetylglucosaminidase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative beta-N-acetylglucosaminidase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67SQ8_SYMTH
beta-N-acetylglucosaminidase
13_1_40cm_2_scaffold_2567_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13916..14308)
DNA (393bp) protein (131aa)
id=3823038 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
id=3823038 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_2567_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14379..14843)
DNA (465bp) protein (155aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6I2_SPHTD
oxidoreductase molybdopterin binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
oxidoreductase molybdopterin binding protein
13_1_40cm_2_scaffold_2567_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14816..15925)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00036AFBB7
oxidoreductase molybdopterin binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Sulfite oxidase-like oxidoreductase, molybdopterin-binding subunit
13_1_40cm_2_scaffold_2567_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16265..17833
DNA (1569bp) protein (523aa)
peptidase S9 prolyl oligopeptidase active site domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
peptidase S9 prolyl oligopeptidase active site domain-containing protein id=24416832 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase S9 prolyl oligopeptidase active site domain-containing protein
13_1_40cm_2_scaffold_2567_20
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17841..18317
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002DEE4E3
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDX82708.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
hypothetical protein
13_1_40cm_2_scaffold_2567_21
unknown

Not on your lists

comp(18156..18629)
DNA (474bp) protein (158aa)

This feature has no annotations

Displaying 21 items

View Taxonomy