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13_1_40cm_2_scaffold_263

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_263_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(44..394)
DNA (351bp) protein (117aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PQH5_KRIFD
PPOX class probable F420-dependent enzyme, MSMEG_5819 family
PPOX class probable F420-dependent enzyme, MSMEG_5819 family {ECO:0000313|EMBL:AIF84335.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitr
13_1_40cm_2_scaffold_263_2
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(568..1380)
DNA (813bp) protein (271aa)
putative 3-demethylubiquinol 3-O-methyltransferase (EC:2.1.1.64)
Methyltransferase type 11 id=2115474 bin=GWB2_Geobacter-like_52_12 species=Anoxybacillus sp. DT3-1 genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
type 11 methyltransferase Tax=GWB2_Geobacteraceae_52_12_curated
13_1_40cm_2_scaffold_263_3
unknown

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comp(1506..3017)
DNA (1512bp) protein (504aa)

This feature has no annotations

13_1_40cm_2_scaffold_263_4
Lysinibacillus boronitolerans, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3160..3918)
DNA (759bp) protein (253aa)
KNTase domain protein n=1 Tax=Paenibacillus lactis 154 RepID=G4HP66_9BACL
Kanamycin nucleotidyltransferase {ECO:0000313|EMBL:KGR80739.1}; TaxID=1294264 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus boronitolerans J
aminoglycoside nucleotidyltransferase
13_1_40cm_2_scaffold_263_5
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4014..4901
DNA (888bp) protein (296aa)
Putative DNA methylase id=3924656 bin=GWF2_Ignavibacteria_35_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
putative DNA methylase Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
hypothetical protein
13_1_40cm_2_scaffold_263_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4973..5236
DNA (264bp) protein (88aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
Putative phosphoribosylformylglycinamidine synthase PurS n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFC8_NITGG
purS; phosphoribosylformylglycinamidine synthase PurS
13_1_40cm_2_scaffold_263_7

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5244..5948
DNA (705bp) protein (235aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421};; Formyl
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=uncultured archaeon W5-61a RepID=H9BX94_9ARCH
13_1_40cm_2_scaffold_263_8
unknown

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6210..6404
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_2_scaffold_263_9
unknown

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6401..6604
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_2_scaffold_263_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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6601..8817
DNA (2217bp) protein (739aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Bathyarchaeota_48_13_curated
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJS1_NITGG
13_1_40cm_2_scaffold_263_11
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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8898..10439
DNA (1542bp) protein (514aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=uncultured archaeon W5-61a RepID=H9BX96_9ARCH
class II glutamine amidotransferase Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_2_scaffold_263_12
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10463..11752
DNA (1290bp) protein (430aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037BAE47
phosphoribosylamine--glycine ligase
13_1_40cm_2_scaffold_263_13
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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11810..12175
DNA (366bp) protein (122aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_Micrarchaeota_36_9_curated
hypothetical protein; K02503 Hit-like protein involved in cell-cycle regulation id=5102008 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
histidine triad (HIT) protein
13_1_40cm_2_scaffold_263_14
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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12289..13026
DNA (738bp) protein (246aa)
hypothetical protein Tax=RBG_16_Chloroflexi_48_8_curated
13_1_40cm_2_scaffold_263_15
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13029..13652
DNA (624bp) protein (208aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:AIC15752.1}; EC=2.1.2.2 {ECO:0000313|EMBL:AIC15752.1};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales;
Putative Formyl transferase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXU8_9ARCH
13_1_40cm_2_scaffold_263_16
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13649..14506
DNA (858bp) protein (286aa)
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includ
Bifunctional protein FolD n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=FOLD_SYMTH
methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
13_1_40cm_2_scaffold_263_17
unknown

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14518..15417
DNA (900bp) protein (300aa)

This feature has no annotations

13_1_40cm_2_scaffold_263_18
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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15477..16073
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; Flags: Precursor;; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoana
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RGK7_MOOTA
5-formyltetrahydrofolate cyclo-ligase
13_1_40cm_2_scaffold_263_19
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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16070..16504
DNA (435bp) protein (145aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TBP4_9EURY
13_1_40cm_2_scaffold_263_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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16518..17357
DNA (840bp) protein (280aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6) Tax=RBG_16_Thaumarchaeota_49_8_curated
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003826EBE
13_1_40cm_2_scaffold_263_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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17360..18412
DNA (1053bp) protein (351aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] id=14427635 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
purM; Phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
13_1_40cm_2_scaffold_263_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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18572..19228
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUC2_METMJ
hypothetical protein; K07220 hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
13_1_40cm_2_scaffold_263_23
R_NC10_66_22, NC10, Bacteria

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19242..20255
DNA (1014bp) protein (338aa)
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Phosphate/sulphate permease id=3122079 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pit; low-affinity phosphate transporter
13_1_40cm_2_scaffold_263_24
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(20367..20465)
DNA (99bp) protein (33aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
Displaying 24 items

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