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13_1_40cm_2_scaffold_267

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_267_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..781)
DNA (780bp) protein (260aa)
pyrG; CTP synthase (CTP synthetase) (EC:6.3.4.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pyrG; CTP synthase (CTP synthetase) (EC:6.3.4.2) id=14625764 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pyrG; CTP synthetase (EC:6.3.4.2)
13_1_40cm_2_scaffold_267_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(783..1097)
DNA (315bp) protein (105aa)
hypothetical protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] id=14625765 bin=bin7_NC10_sister species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=CSP1_6_Rokubacteria
13_1_40cm_2_scaffold_267_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1063..2382)
DNA (1320bp) protein (440aa)
poly A polymerase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] id=14625765 bin=bin7_NC10_sister species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin7_NC10_sister organism_group=NC10
polynucleotide adenylyltransferase
13_1_40cm_2_scaffold_267_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2507..3439)
DNA (933bp) protein (311aa)
XerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD id=14625766 bin=bin7_NC10_sister species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
XerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD Tax=CSP1_6_Rokubacteria
tyrosine recombinase XerD
13_1_40cm_2_scaffold_267_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3451..4962)
DNA (1512bp) protein (504aa)
integral membrane protein MviN; K03980 virulence factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integral membrane protein MviN id=2720726 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
virulence factor protein
13_1_40cm_2_scaffold_267_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


5057..5317
DNA (261bp) protein (87aa)
ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 id=14625768 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
rpsT; 30S ribosomal protein S20
13_1_40cm_2_scaffold_267_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5320..6645)
DNA (1326bp) protein (442aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2720728 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_267_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6642..7661)
DNA (1020bp) protein (340aa)
holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative DNA polymerase III, delta subunit id=2720729 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Eggerthella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_267_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7666..8169)
DNA (504bp) protein (168aa)
Putative uncharacterized protein id=2720730 bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_267_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(8166..10655)
DNA (2490bp) protein (830aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=14625772 bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
leuS; leucyl-tRNA ligase
13_1_40cm_2_scaffold_267_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10765..11028)
DNA (264bp) protein (88aa)
id=14625776 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625776 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_267_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11073..12920)
DNA (1848bp) protein (616aa)
UvrABC system protein C id=2720733 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=GWA2_Rokubacteria_73_35_curated
uvrC; excinuclease ABC subunit C
13_1_40cm_2_scaffold_267_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13140..13835
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNE1_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KGT75676.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
hypothetical protein
13_1_40cm_2_scaffold_267_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13819..14490)
DNA (672bp) protein (224aa)
Phosphoesterase PA-phosphatase related protein id=4161366 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative integral membrane protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_2_scaffold_267_15
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14697..15371
DNA (675bp) protein (225aa)
Uncharacterized membrane protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W3L5_MAGSA
hypothetical protein
Uncharacterized membrane protein {ECO:0000313|EMBL:BAE51560.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Ma
13_1_40cm_2_scaffold_267_16
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15504..16127)
DNA (624bp) protein (208aa)
Propeptide PepSY and peptidase M4 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B223_9PROT
propeptide PepSY and peptidase M4
Propeptide PepSY and peptidase M4 {ECO:0000313|EMBL:BAN34707.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuri
13_1_40cm_2_scaffold_267_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(16124..16834)
DNA (711bp) protein (237aa)
hypothetical protein id=14428808 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_2_scaffold_267_18
unknown

Not on your lists

comp(16901..17356)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_2_scaffold_267_19
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17513..17812
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RA29_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ71754.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwane
13_1_40cm_2_scaffold_267_20
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17812..18474
DNA (663bp) protein (221aa)
DNA-binding two-component response regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NZI2_AZOS1 rbh
DNA-binding two-component response regulator rbh
DNA-binding two-component response regulator {ECO:0000313|EMBL:BAI73811.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" so
13_1_40cm_2_scaffold_267_21
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18471..19823
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035F4C88
two-component sensor histidine kinase
13_1_40cm_2_scaffold_267_22
unknown

Not on your lists

19840..20097
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_2_scaffold_267_23
Desulfospira joergensenii, Desulfospira, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20105..21406)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B5232C
hypothetical protein
13_1_40cm_2_scaffold_267_24
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(21721..22359)
DNA (639bp) protein (213aa)
Putative uncharacterized protein Tax=RBG_16_Caldithrix_48_16_curated
Putative uncharacterized protein id=2289641 bin=GWB2_Chloroflexi_54_36 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
13_1_40cm_2_scaffold_267_25
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22360..23286)
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G757_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27625.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="
13_1_40cm_2_scaffold_267_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23362..23562)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Aeromonas media WS RepID=K2I9R9_AERME
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein
13_1_40cm_2_scaffold_267_27
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23598..23786)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI0003630DDF
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:CEL21707.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibd
acriflavin resistance protein
13_1_40cm_2_scaffold_267_28
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(23783..24274)
DNA (492bp) protein (164aa)
acriflavin resistance protein Tax=CSP1_5_NC10
acriflavin resistance protein id=14428803 bin=bin3_NC10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
acriflavin resistance protein
13_1_40cm_2_scaffold_267_29
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(24379..25140)
DNA (762bp) protein (254aa)
acriflavin resistance protein id=14428803 bin=bin3_NC10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
acriflavin resistance protein Tax=CSP1_5_NC10
acriflavin resistance protein
Displaying 29 items

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