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13_1_40cm_2_scaffold_2626

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2626_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1..606
DNA (606bp) protein (202aa)
slr1768; hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_2626_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

666..1244
DNA (579bp) protein (193aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative uncharacterized protein id=3290479 bin=GWC2_Chloroflexi_73_18 species=Nocardiopsis dassonvillei genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_2_scaffold_2626_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1270..2493)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q3T0_9DELT
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_2_scaffold_2626_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2671..3159
DNA (489bp) protein (163aa)
HAD family hydrolase; K01112 [EC:3.1.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BBK5_PARDP
HAD family hydrolase
13_1_40cm_2_scaffold_2626_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3171..4469
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W8_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
von Willebrand factor type A
13_1_40cm_2_scaffold_2626_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4466..5797)
DNA (1332bp) protein (444aa)
Ammonium transporter NrgA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A872_GEMAT
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2626_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5794..6189)
DNA (396bp) protein (132aa)
Nitrogen regulatory protein P-II n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A871_GEMAT
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:AHG93827.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2626_8
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6186..7061)
DNA (876bp) protein (292aa)
Beta-lactamase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QP24_9DELT
Beta-lactamase {ECO:0000313|EMBL:EPX58313.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
beta-lactamase
13_1_40cm_2_scaffold_2626_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7484..10672
DNA (3189bp) protein (1063aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCK1_CONWI
2-oxoglutarate dehydrogenase, E1 subunit
13_1_40cm_2_scaffold_2626_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10742..11254
DNA (513bp) protein (171aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S9_GEMAT
hypothetical membrane protein; K02221 YggT family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function YGGT
13_1_40cm_2_scaffold_2626_11
unknown

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11330..11485
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_2_scaffold_2626_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11427..12440)
DNA (1014bp) protein (338aa)
Probable terminal oxidase subunit II n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B1_SORC5
cytochrome bd ubiquinol oxidase subunit II
Cytochrome bd ubiquinol oxidase subunit II {ECO:0000313|EMBL:AHG88104.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2626_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(12440..13702)
DNA (1263bp) protein (421aa)
cytochrome BD ubiquinol oxidase subunit I n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6CDCA
cytochrome bd-type quinol oxidase subunit 1 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cytochrome bd ubiquinol oxidase subunit I
13_1_40cm_2_scaffold_2626_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13699..14538)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJK9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_2626_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14572..15222)
DNA (651bp) protein (217aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_2626_16
unknown

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comp(15206..15595)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_2_scaffold_2626_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15592..16092)
DNA (501bp) protein (167aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R4N6_ISOPI
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_2_scaffold_2626_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16196..17971
DNA (1776bp) protein (592aa)
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; K00547 homocysteine S-methyltransferase [EC:2.1.1.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_cura
Methylenetetrahydrofolate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5U0_GEMAT
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein
13_1_40cm_2_scaffold_2626_19
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

17988..18893
DNA (906bp) protein (302aa)
formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
Putative formamidopyrimidine-DNA glycosylase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X345_9BACT
Putative formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:AAP58519.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
13_1_40cm_2_scaffold_2626_20
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18890..19399
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI0003826489
Sortase {ECO:0000313|EMBL:ERN43076.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KORDI 51-2.;"
acetyltransferase
13_1_40cm_2_scaffold_2626_21
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19396..20142
DNA (747bp) protein (249aa)
methylase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
conserved hypothethical protein, SAM-dependent methyltransferase domain
hypothetical protein id=12495644 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
13_1_40cm_2_scaffold_2626_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20139..20642
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2JZT8_9FLAO
protein of unknown function DUF664
Uncharacterized protein {ECO:0000313|EMBL:AHG93073.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2626_23
Bacillus sp. SJS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20639..20878
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Bacillus anthracis RepID=UPI0001B4160C
Damage-inducible protein DinB {ECO:0000313|EMBL:KEZ56867.1}; TaxID=1423321 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SJS.;"
hypothetical protein
Displaying 23 items

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