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13_1_40cm_2_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_27_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

1..837
DNA (837bp) protein (279aa)
putative (S)-2,3-Di-O-farnesylgeranylglyceryl synthase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RBG_16_Archaea_50_20_curated
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NA62_9ARCH
13_1_40cm_2_scaffold_27_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(827..2113)
DNA (1287bp) protein (429aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] Tax=RBG_16_Archaea_50_20_curated
3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BN62_9EURY
3-hydroxy-3-methylglutaryl-coenzyme A reductase
13_1_40cm_2_scaffold_27_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2123..3241)
DNA (1119bp) protein (373aa)
fni; isopentenyl pyrophosphate isomerase (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] Tax=RBG_16_Archaea_50_20_curated
fni; Isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U101_9EURY rbh
13_1_40cm_2_scaffold_27_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3238..4191)
DNA (954bp) protein (318aa)
mevalonate kinase (EC:2.7.1.36) Tax=RBG_13_Bathyarchaeota_46_16b_curated
Mevalonate kinase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RYL2_THEPD
mevalonate kinase
13_1_40cm_2_scaffold_27_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(4276..5124)
DNA (849bp) protein (283aa)
MEMO1 family protein MK0963 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Y963_METKA
dioxygenase; K06990 Tax=RBG_13_Bathyarchaeota_46_16b_curated
dioxygenase
13_1_40cm_2_scaffold_27_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(5121..5798)
DNA (678bp) protein (226aa)
30S ribosomal protein S2 n=4 Tax=Methanobrevibacter RepID=RS2_METS3
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_16_Archaea_50_20_curated
rps2P; 30S ribosomal protein S2
13_1_40cm_2_scaffold_27_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(5806..6030)
DNA (225bp) protein (75aa)
DNA-directed RNA polymerase subunit N n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B761_ACIHW
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
RNA polymerase subunit N
13_1_40cm_2_scaffold_27_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(6043..6459)
DNA (417bp) protein (139aa)
30S ribosomal protein S9 n=1 Tax=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) RepID=RS9_DESK1
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_13_Bathyarchaeota_38_9_curated
rps9p; 30S ribosomal protein S9P
13_1_40cm_2_scaffold_27_9
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(6450..6911)
DNA (462bp) protein (154aa)
50S ribosomal protein L13 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGB3_PYRYC
Ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
13_1_40cm_2_scaffold_27_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(6908..7543)
DNA (636bp) protein (212aa)
rpoD; DNA-directed RNA polymerase subunit D; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated
RNA polymerase insert n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB81_9ARCH
RNA polymerase insert
13_1_40cm_2_scaffold_27_11
unknown

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7780..7905
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_2_scaffold_27_12
unknown

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comp(8003..8248)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_2_scaffold_27_13
unknown

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comp(8422..8871)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_2_scaffold_27_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(9015..9701)
DNA (687bp) protein (229aa)
30S ribosomal protein S4 n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7DAE3_STAHD
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S4
13_1_40cm_2_scaffold_27_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(9720..10181)
DNA (462bp) protein (154aa)
30S ribosomal protein S13 n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TDW4_THEC1
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S13
13_1_40cm_2_scaffold_27_16
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

10602..11024
DNA (423bp) protein (141aa)
S-adenosylmethionine decarboxylase proenzyme; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=CG_Micra_05
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0V2_DICTD
S-adenosylmethionine decarboxylase
13_1_40cm_2_scaffold_27_17
unknown

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11073..11261
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_2_scaffold_27_18
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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11837..12700
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035E799E
peptidase M50 Tax=RBG_13_Bathyarchaeota_52_12_curated
peptidase M50
13_1_40cm_2_scaffold_27_19
unknown

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comp(12710..12826)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_2_scaffold_27_20
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(12863..13642)
DNA (780bp) protein (260aa)
putative rRNA pseudouridine synthase (EC:4.2.1.70)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=3 Tax=Thermofilum RepID=A1RXE0_THEPD
13_1_40cm_2_scaffold_27_21
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13612..13896)
DNA (285bp) protein (95aa)
trub; H/ACA RNA-protein complex component Cbf5p (EC:4.2.1.70); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=RBG_16_Bathyarchaeota_48_13_curated
Probable tRNA pseudouridine synthase B n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMQ1_METH6
putative tRNA pseudouridine synthase B
13_1_40cm_2_scaffold_27_22
Staphylothermus hellenicus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(13987..14286)
DNA (300bp) protein (100aa)
50S ribosomal protein L14e n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9Q9_STAHD
50S ribosomal protein L14E/L6E/L27E-like protein
50S ribosomal protein L14e {ECO:0000256|HAMAP-Rule:MF_00721}; TaxID=591019 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylother
13_1_40cm_2_scaffold_27_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(14334..14888)
DNA (555bp) protein (185aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=RBG_16_Archaea_50_20_curated
Cytidylate kinase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECH2_PYRF1
cytidylate kinase
13_1_40cm_2_scaffold_27_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(15151..15729)
DNA (579bp) protein (193aa)
Membrane protein-like protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUT5_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_27_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15734..16147)
DNA (414bp) protein (138aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RBG_16_Archaea_50_20_curated
adkA; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Aeropyrum camini SY1 = JCM 12091 RepID=U3T9E3_9CREN
13_1_40cm_2_scaffold_27_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(16326..17762)
DNA (1437bp) protein (479aa)
Protein translocase subunit SecY n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2G8_9ARCH rbh
hypothetical protein; K10956 protein transport protein SEC61 subunit alpha Tax=RBG_16_Archaea_50_20_curated
preprotein translocase subunit SecY
13_1_40cm_2_scaffold_27_27
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


comp(17817..18263)
DNA (447bp) protein (149aa)
50S ribosomal protein L15P n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECG7_PYRF1
50S ribosomal protein L15P
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=694429 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Pyrolobus.;" source="Pyrolobus fumarii (stra
13_1_40cm_2_scaffold_27_28
unknown

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18801..18959
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_2_scaffold_27_29
unknown

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19394..20902
DNA (1509bp) protein (503aa)

This feature has no annotations

13_1_40cm_2_scaffold_27_30
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(21038..21538)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA88_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40731.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
Displaying items 1-30 of 52 in total

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