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13_1_40cm_2_scaffold_2879

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2879_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..156)
DNA (156bp) protein (52aa)
Nucleoside:H symporter n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFB0_RHOMR
nucleoside:H symporter
Nucleoside:H symporter {ECO:0000313|EMBL:ACY48628.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
13_1_40cm_2_scaffold_2879_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(161..559)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_2879_3
unknown

Not on your lists

comp(556..894)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_2_scaffold_2879_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(931..1641)
DNA (711bp) protein (237aa)
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-); K06196 cytochrome c-type biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-)
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W2_GEMAT
13_1_40cm_2_scaffold_2879_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1643..2188)
DNA (546bp) protein (182aa)
pdaD; pyruvoyl-dependent arginine decarboxylase; K02626 arginine decarboxylase [EC:4.1.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Pyruvoyl-dependent arginine decarboxylase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2H1_CALAS
pdaD; pyruvoyl-dependent arginine decarboxylase
13_1_40cm_2_scaffold_2879_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2211..2603)
DNA (393bp) protein (131aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_2_scaffold_2879_7
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2564..3688)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZV0_CORCM
Uncharacterized protein {ECO:0000313|EMBL:KFE68100.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_40cm_2_scaffold_2879_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3722..5932)
DNA (2211bp) protein (737aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=861299 species="Bacteria; G
Primosomal protein N n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V7_GEMAT
primosomal protein N
13_1_40cm_2_scaffold_2879_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5935..6963)
DNA (1029bp) protein (343aa)
Putative dipeptide epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V6_GEMAT
putative dipeptide epimerase
Putative dipeptide epimerase {ECO:0000313|EMBL:BAH37966.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (stra
13_1_40cm_2_scaffold_2879_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6954..7439)
DNA (486bp) protein (162aa)
Magnesium transport protein CorA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V4_GEMAT
corA; magnesium transport protein CorA; K03284 magnesium transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
corA; magnesium transport protein CorA
13_1_40cm_2_scaffold_2879_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7388..7939)
DNA (552bp) protein (184aa)
Magnesium transport protein CorA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V4_GEMAT
Mg2 transporter protein CorA family protein
Mg2 transporter protein CorA family protein {ECO:0000313|EMBL:AHG90358.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2879_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7944..8843)
DNA (900bp) protein (300aa)
Histone deacetylase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V3_GEMAT
histone deacetylase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Histone deacetylase domain protein
13_1_40cm_2_scaffold_2879_13
unknown

Not on your lists

comp(8843..9313)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_2_scaffold_2879_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9310..9591)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_2879_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9588..10664)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37189.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_2_scaffold_2879_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10819..11259
DNA (441bp) protein (147aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
heat shock protein Hsp20
Heat shock protein Hsp20 id=3138625 bin=GWA2_Deltaproteo_65_63 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
13_1_40cm_2_scaffold_2879_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11691..12920)
DNA (1230bp) protein (410aa)
Citrate transporter n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SN05_9BACT
citrate transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
arsenical pump membrane protein
13_1_40cm_2_scaffold_2879_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12917..14227)
DNA (1311bp) protein (437aa)
Amine oxidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NZ3_SOLUE
amine oxidase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
amine oxidase
13_1_40cm_2_scaffold_2879_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14235..14525)
DNA (291bp) protein (97aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_2879_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(14522..15865)
DNA (1344bp) protein (448aa)
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRC9_9BACT
13_1_40cm_2_scaffold_2879_21
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15909..16988)
DNA (1080bp) protein (360aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P497_9FIRM
Glycerate kinase {ECO:0000313|EMBL:EKP95875.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaeroba
13_1_40cm_2_scaffold_2879_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17387..18682)
DNA (1296bp) protein (432aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Adenylosuccinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T9_GEMAT
Adenylosuccinate synthetase
13_1_40cm_2_scaffold_2879_23
unknown

Not on your lists

comp(18757..19638)
DNA (882bp) protein (294aa)

This feature has no annotations

13_1_40cm_2_scaffold_2879_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19631..20527)
DNA (897bp) protein (299aa)
Putative dihydrodipicolinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T6_GEMAT
putative dihydrodipicolinate synthetase Tax=RBG_16_Gemmatimonadetes_66_8_curated
dihydrodipicolinate synthetase
13_1_40cm_2_scaffold_2879_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20524..21684)
DNA (1161bp) protein (387aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T5_GEMAT
pilT; twitching mobility protein Tax=GWC2_Gemmatimonadetes_71_10_curated
twitching motility protein
13_1_40cm_2_scaffold_2879_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21685..22647)
DNA (963bp) protein (321aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T4_GEMAT
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAH37944.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_2_scaffold_2879_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22713..23405)
DNA (693bp) protein (231aa)
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein id=24468471 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
MgtC/SapB transporter
13_1_40cm_2_scaffold_2879_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23398..24384)
DNA (987bp) protein (329aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Tryptophan--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T3_GEMAT
Tryptophan-tRNA ligase, bacterial-type
13_1_40cm_2_scaffold_2879_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24396..25193
DNA (798bp) protein (266aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative inositol-1-monophosphatase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K733_AZOSB
inositol monophosphatase
13_1_40cm_2_scaffold_2879_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

25516..26310
DNA (795bp) protein (265aa)
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
Formiminotransferase-cyclodeaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T1_GEMAT
glutamate formiminotransferase
Displaying 30 items

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