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13_1_40cm_2_scaffold_2942

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2942_1
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..960
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QWX5_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK25553.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
13_1_40cm_2_scaffold_2942_2
CSP1_5_NC10, NC10, Bacteria

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1100..2734
DNA (1635bp) protein (545aa)
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase
13_1_40cm_2_scaffold_2942_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2741..3394)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003677AA2
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AHG88371.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2942_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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3423..4496
DNA (1074bp) protein (358aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHC5_CHLTF
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain-containing protein
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain protein {ECO:0000313|EMBL:AEP12188.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision
13_1_40cm_2_scaffold_2942_5
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

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4531..5955
DNA (1425bp) protein (475aa)
glucosylceramidase; K01201 glucosylceramidase [EC:3.2.1.45] Tax=RBG_13_Bacteroidetes_43_22_curated
fjo:Fjoh_1562 glycoside hydrolase; K01201 glucosylceramidase [EC:3.2.1.45] id=717550 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
O-glycosyl hydrolase
13_1_40cm_2_scaffold_2942_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5988..6290
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAW7_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87628.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2942_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6497..6706
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT
Cold-shock protein DNA-binding protein
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG89448.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2942_8
unknown

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7089..7742
DNA (654bp) protein (218aa)

This feature has no annotations

13_1_40cm_2_scaffold_2942_9
unknown

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7828..8385
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_40cm_2_scaffold_2942_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8341..11805)
DNA (3465bp) protein (1155aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036361C6
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
AfsR/DnrI/RedD family transcriptional regulator
13_1_40cm_2_scaffold_2942_11
unknown

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comp(12155..13060)
DNA (906bp) protein (302aa)

This feature has no annotations

13_1_40cm_2_scaffold_2942_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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13124..13609
DNA (486bp) protein (162aa)
Clp amino terminal domain-containing protein {ECO:0000313|EMBL:CDM67061.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphat
13_1_40cm_2_scaffold_2942_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13680..14537)
DNA (858bp) protein (286aa)
Creatininase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZR5_TERSS
Creatininase
Creatininase {ECO:0000313|EMBL:AHG92632.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2942_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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14585..15001
DNA (417bp) protein (139aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWZ5_9BACT
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EDY21315.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cupin
13_1_40cm_2_scaffold_2942_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14985..16190)
DNA (1206bp) protein (402aa)
Gll0875 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM92_GLOVI
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AHG91806.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2942_16
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(16187..17833)
DNA (1647bp) protein (549aa)
Gll0876 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM91_GLOVI
AcrB/AcrD/AcrF family multidrug efflux protein
Gll0876 protein {ECO:0000313|EMBL:BAC88817.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_1_40cm_2_scaffold_2942_17
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(17781..19313)
DNA (1533bp) protein (511aa)
Gll0876 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM91_GLOVI
AcrB/AcrD/AcrF family multidrug efflux protein
Gll0876 protein {ECO:0000313|EMBL:BAC88817.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_1_40cm_2_scaffold_2942_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19324..20601)
DNA (1278bp) protein (426aa)
Putative outer membrane macrolide efflux protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CKE9_MYXFH
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG91808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2942_19
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20678..21274)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002D9C5B7
Uncharacterized protein {ECO:0000313|EMBL:KDN54884.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
13_1_40cm_2_scaffold_2942_20
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(21488..22837)
DNA (1350bp) protein (450aa)
Response regulator of zinc sigma-54-dependent two-component system n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P037_9DELT
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Fis family transcriptional regulator
13_1_40cm_2_scaffold_2942_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22834..23133)
DNA (300bp) protein (100aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK85_KORVE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABF42715.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_1_40cm_2_scaffold_2942_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(23226..23426)
DNA (201bp) protein (67aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK70_KORVE
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABF42730.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source=
Displaying 22 items

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