ggKbase home page

13_1_40cm_2_scaffold_325

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_325_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2..568
DNA (567bp) protein (189aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000255|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000255|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MIAB_KORVE
tRNA-i(6)A37 modification enzyme MiaB
13_1_40cm_2_scaffold_325_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

586..1071
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQH4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40876.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_2_scaffold_325_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1137..1445
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPK1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41199.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_2_scaffold_325_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1583..2527
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037AB081
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABJ87696.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Cand
13_1_40cm_2_scaffold_325_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2815..3678)
DNA (864bp) protein (288aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ6_KORVE
tRNA pseudouridine synthase B
13_1_40cm_2_scaffold_325_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3763..4455
DNA (693bp) protein (231aa)
Rhomboid-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ5_KORVE
rhomboid-like protein
Rhomboid-like protein {ECO:0000313|EMBL:ABF41205.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
13_1_40cm_2_scaffold_325_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4588..5340)
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ3_KORVE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABF41207.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_1_40cm_2_scaffold_325_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5333..5929)
DNA (597bp) protein (199aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ1_KORVE
GTP cyclohydrolase
13_1_40cm_2_scaffold_325_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6008..6430)
DNA (423bp) protein (141aa)
6-pyruvoyl tetrahydropterin synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ0_KORVE
6-pyruvoyl tetrahydrobiopterin synthase
6-pyruvoyl tetrahydropterin synthase {ECO:0000313|EMBL:ABF41210.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter vers
13_1_40cm_2_scaffold_325_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6427..6837)
DNA (411bp) protein (137aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteria
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPI9_KORVE
6-pyruvoyl tetrahydrobiopterin synthase
13_1_40cm_2_scaffold_325_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6886..7968)
DNA (1083bp) protein (361aa)
Glycosyl transferase, family 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPI8_KORVE
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABF41212.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_2_scaffold_325_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7994..8482
DNA (489bp) protein (163aa)
Thioredoxin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPI7_KORVE
thioredoxin-like protein
Thioredoxin-like protein {ECO:0000313|EMBL:ABF41213.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
13_1_40cm_2_scaffold_325_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8575..9609
DNA (1035bp) protein (345aa)
Glycine oxidase {ECO:0000313|EMBL:ABF40736.1}; EC=1.4.3.19 {ECO:0000313|EMBL:ABF40736.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
Glycine oxidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQW4_KORVE
glycine oxidase ThiO
13_1_40cm_2_scaffold_325_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9623..11149
DNA (1527bp) protein (509aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQK0_KORVE
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:ABF40850.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
13_1_40cm_2_scaffold_325_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11530..15471
DNA (3942bp) protein (1314aa)
Chromosome partition protein Smc n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=SMC_KORVE rbh
chromosome segregation protein SMC
Chromosome partition protein Smc {ECO:0000255|HAMAP-Rule:MF_01894}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter vers
13_1_40cm_2_scaffold_325_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15726..16637
DNA (912bp) protein (304aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPE1_KORVE rbh
phosphoribosylaminoimidazolesuccinocarboxamide synthase
13_1_40cm_2_scaffold_325_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16665..17216
DNA (552bp) protein (184aa)
Colicin V production protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPE0_KORVE
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:ABF41260.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kori
13_1_40cm_2_scaffold_325_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17275..17553
DNA (279bp) protein (93aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD9_KORVE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABF41261.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_1_40cm_2_scaffold_325_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17621..18994)
DNA (1374bp) protein (458aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD8_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41262.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_2_scaffold_325_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19304..20032
DNA (729bp) protein (243aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD7_KORVE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABF41263.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_1_40cm_2_scaffold_325_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20664..20975
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD5_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41265.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_2_scaffold_325_22
unknown

Not on your lists

21015..21140
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 22 items

View Taxonomy