ggKbase home page

13_1_40cm_2_scaffold_3445

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3445_1
unknown

Not on your lists

comp(3..389)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_2_scaffold_3445_2
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(473..2092)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MDA2_9ACTO
Drug resistance transporter {ECO:0000313|EMBL:EFL04956.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
Drug resistance transporter
13_1_40cm_2_scaffold_3445_3
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2200..2631)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TPL6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGN34288.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
13_1_40cm_2_scaffold_3445_4
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2680..3327
DNA (648bp) protein (216aa)
Transcriptional regulator, TetR family n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PZQ3_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH96827.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_40cm_2_scaffold_3445_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3335..4471
DNA (1137bp) protein (379aa)
PT repeat-containing protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDL0_9CHLR
PT repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PT repeat-containing protein
13_1_40cm_2_scaffold_3445_6
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4618..6279
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036E02F6
Signal peptide protein {ECO:0000313|EMBL:EPX97981.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08
Protein of unknown function (DUF1800)
13_1_40cm_2_scaffold_3445_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

6290..7573
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJI8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89595.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
twin-arginine translocation pathway signal protein
13_1_40cm_2_scaffold_3445_8
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7645..7896)
DNA (252bp) protein (84aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
13_1_40cm_2_scaffold_3445_9
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8002..8463
DNA (462bp) protein (154aa)
Ferric reductase domain protein protein transmembrane component domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IWX2_FRASU
ferric reductase transmembrane domain-containing protein
Ferric reductase domain protein protein transmembrane component domain protein {ECO:0000313|EMBL:ADP82596.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source
13_1_40cm_2_scaffold_3445_10
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8463..9224
DNA (762bp) protein (254aa)
Methyltransferase type 11 n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XS37_HIRBI
Methyltransferase type 11 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
Methyltransferase type 11
13_1_40cm_2_scaffold_3445_11
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9221..10732)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0RYZ5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJG06791.1}; Flags: Precursor;; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source
hypothetical protein
13_1_40cm_2_scaffold_3445_12
unknown

Not on your lists

comp(10743..10994)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_2_scaffold_3445_13
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

11643..12056
DNA (414bp) protein (138aa)
Amine oxidase, flavin-containing protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYU4_THERP
amine oxidase, flavin-containing protein
Amine oxidase, flavin-containing protein {ECO:0000313|EMBL:ACM05837.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium r
13_1_40cm_2_scaffold_3445_14

Not on your lists

12068..12406
DNA (339bp) protein (113aa)
Marine sediment metagenome DNA, contig: S01H1_L04279 {ECO:0000313|EMBL:GAF83247.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
F420-dependent oxidoreductase id=14632488 bin=bin9_gal15 species=Natronorubrum bangense genus=Natronorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin9_gal15 organism_group=GAL15
luciferase family protein
13_1_40cm_2_scaffold_3445_15
unknown

Not on your lists

12559..12876
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_2_scaffold_3445_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12933..13520
DNA (588bp) protein (196aa)
Signal peptidase I n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1J2_PELTS
lepB; signal peptidase I Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
LepB; signal peptidase I
13_1_40cm_2_scaffold_3445_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13525..13893)
DNA (369bp) protein (123aa)
Export-related chaperone CsaA n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5P4_SPHTD
export-related chaperone CsaA; K06878 tRNA-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
export-related chaperone CsaA
13_1_40cm_2_scaffold_3445_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13900..14196
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6W8_9CHLR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_2_scaffold_3445_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14193..14795
DNA (603bp) protein (201aa)
molybdopterin binding oxidoreductase; K07147 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
molybdopterin-binding oxidoreductase; K07147 id=14632273 bin=bin9_gal15 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
oxidoreductase protein
13_1_40cm_2_scaffold_3445_20
unknown

Not on your lists

comp(14812..15408)
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_2_scaffold_3445_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15528..16208)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00036D5468
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_2_scaffold_3445_22
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

16255..17682
DNA (1428bp) protein (476aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=309801 species="Bacteria; Ch
Glutamate--tRNA ligase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1Z0_THERP
13_1_40cm_2_scaffold_3445_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

17682..19652
DNA (1971bp) protein (657aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
1,4-dihydroxy-2-naphthoate octaprenyltransferase id=2026404 bin=GWD2_Chloroflexi_49_16 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
1,4-dihydroxy-2-naphthoate octaprenyltransferase
13_1_40cm_2_scaffold_3445_24
unknown

Not on your lists

19660..19755
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 24 items

View Taxonomy