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13_1_40cm_2_scaffold_3565

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3565_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2..1078
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003654F50
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
amidohydrolase
13_1_40cm_2_scaffold_3565_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1047..1994)
DNA (948bp) protein (316aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025L3_SOLUE
pyridoxal-5'-phosphate-dependent protein subunit beta
13_1_40cm_2_scaffold_3565_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2027..2920)
DNA (894bp) protein (298aa)
Ornithine cyclodeaminase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIR8_THET1
ornithine cyclodeaminase/mu-crystallin
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:AHG88343.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_3565_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2975..4486)
DNA (1512bp) protein (504aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_40cm_2_scaffold_3565_5
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4527..5591)
DNA (1065bp) protein (355aa)
Putative Glycoside hydrolase, family 5 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFX8_9CHLR
Putative Glycoside hydrolase, family 5 {ECO:0000313|EMBL:CCF83590.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrol
cellulose-binding family II protein
13_1_40cm_2_scaffold_3565_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5677..8112
DNA (2436bp) protein (812aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJT8_RHOM4
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG92657.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_3565_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8113..11325)
DNA (3213bp) protein (1071aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2U2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHG93368.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_40cm_2_scaffold_3565_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11390..12670)
DNA (1281bp) protein (427aa)
Serpin (Serine proteinase inhibitor) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBT3_SALRM rbh
serine proteinase inhibitor; K13963 serpin B Tax=GWC2_Gemmatimonadetes_71_10_curated
serine proteinase inhibitor
13_1_40cm_2_scaffold_3565_9
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12813..13178
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZ58_HALH1
hypothetical protein Tax=RBG_13_Bacteroidetes_46_8_curated
hypothetical protein
13_1_40cm_2_scaffold_3565_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13175..13708
DNA (534bp) protein (178aa)
hypothetical protein; K00551 phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17] Tax=GWC2_Gemmatimonadetes_71_10_curated
DEHA2A12936p; K00551 phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17]
Predicted protein n=2 Tax=Streptomyces RepID=D6AA26_9ACTO
13_1_40cm_2_scaffold_3565_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(13712..14866)
DNA (1155bp) protein (385aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85585.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
Probable lipoprotein id=4178914 bin=GWA2_Ignavibacteria_55_11 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_2_scaffold_3565_12
unknown

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comp(14863..15228)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_2_scaffold_3565_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15432..16868
DNA (1437bp) protein (479aa)
ligand-gated channel n=1 Tax=Salisaeta longa RepID=UPI0003B4BA4A
bfeA; ferric enterobactin receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
bfeA; ferric enterobactin receptor
13_1_40cm_2_scaffold_3565_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16865..18175
DNA (1311bp) protein (437aa)
ligand-gated channel n=1 Tax=Salisaeta longa RepID=UPI0003B4BA4A
bfeA; ferric enterobactin receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
TonB-dependent receptor
13_1_40cm_2_scaffold_3565_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18188..20848
DNA (2661bp) protein (887aa)
TonB-dependent receptor n=1 Tax=uncultured bacterium W5-51b RepID=H9BX72_9BACT
TonB-dependent receptor Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB-dependent receptor
13_1_40cm_2_scaffold_3565_16
RLO_PLX_64_10, Bacteria

Not on your lists

comp(20941..21414)
DNA (474bp) protein (158aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
id=3479344 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
13_1_40cm_2_scaffold_3565_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21507..22586)
DNA (1080bp) protein (360aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_3565_18
unknown

Not on your lists

23156..23245
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_2_scaffold_3565_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23362..23907
DNA (546bp) protein (182aa)
RNA polymerase sigma factor RpoE n=1 Tax=Schlesneria paludicola RepID=UPI00029A9387
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_2_scaffold_3565_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23904..24446
DNA (543bp) protein (181aa)
Glycoside hydrolase family 13 domain protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LU03_DESBD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13
13_1_40cm_2_scaffold_3565_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

24446..25105
DNA (660bp) protein (220aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_2_scaffold_3565_22
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25177..27438
DNA (2262bp) protein (754aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6EB3C
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
13_1_40cm_2_scaffold_3565_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

27425..28033
DNA (609bp) protein (203aa)
Nitrogen fixation protein NifU n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR6_9BACT
thioredoxin-like protein; K07400 Fe/S biogenesis protein NfuA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thioredoxin-like protein
13_1_40cm_2_scaffold_3565_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

28072..29349
DNA (1278bp) protein (426aa)
biotin carboxylase-like Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14429540 bin=bin3_NC10 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin3_NC10 organism_group=NC10
biotin carboxylase-like
13_1_40cm_2_scaffold_3565_25
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

29346..30581
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C587F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
hypothetical protein
13_1_40cm_2_scaffold_3565_26
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(30526..31353)
DNA (828bp) protein (276aa)
type 11 methyltransferase Tax=RBG_16_Armatimonadetes_67_12_curated
type 11 methyltransferase id=24550730 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative SAM-dependent methyltransferase
13_1_40cm_2_scaffold_3565_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(31350..32030)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEK5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_40cm_2_scaffold_3565_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(32094..32582)
DNA (489bp) protein (163aa)
Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM5_GEMAT
transcription elongation factor GreA/GreB domain-containing protein
Transcription elongation factor GreA/GreB domain-containing protein {ECO:0000313|EMBL:AHG87594.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_3565_29
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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32630..33400
DNA (771bp) protein (257aa)
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning id=14626562 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning Tax=CSP1_6_Rokubacteria
mrp; putative ATPase
13_1_40cm_2_scaffold_3565_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

33397..33804
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZDW7_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
Displaying items 1-30 of 31 in total

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