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13_1_40cm_2_scaffold_35753

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_35753_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..498)
DNA (498bp) protein (166aa)
Amidohydrolase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SIU7_STRM5
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amidohydrolase
13_1_40cm_2_scaffold_35753_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(520..2103)
DNA (1584bp) protein (528aa)
peptidase, m16 (pitrilysin) family (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
processing protease
peptidase M16 domain-containing protein id=12557819 bin=CNBR_ACIDO species=Brevundimonas subvibrioides genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_2_scaffold_35753_3
unknown

Not on your lists

2115..2750
DNA (636bp) protein (212aa)

This feature has no annotations

13_1_40cm_2_scaffold_35753_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2588..3958)
DNA (1371bp) protein (457aa)
Processing peptidase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3H9_HALH1
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66642.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
processing peptidase
13_1_40cm_2_scaffold_35753_5
unknown

Not on your lists

comp(3955..4758)
DNA (804bp) protein (268aa)

This feature has no annotations

13_1_40cm_2_scaffold_35753_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4727..5617)
DNA (891bp) protein (297aa)
amidohydrolase; K07045 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amidohydrolase 2
amidohydrolase; K07045 id=1247849 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_40cm_2_scaffold_35753_7
unknown

Not on your lists

5822..6436
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_40cm_2_scaffold_35753_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6447..7304)
DNA (858bp) protein (286aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTX8_HALO1
13_1_40cm_2_scaffold_35753_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7301..7972)
DNA (672bp) protein (224aa)
glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A928_GEMAT
glycerophosphoryl diester phosphodiesterase family protein
13_1_40cm_2_scaffold_35753_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7969..9093)
DNA (1125bp) protein (375aa)
PhaF protein; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Benzoyl-CoA oxygenase component B id=1975393 bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
benzoyl-CoA oxygenase subunit beta
13_1_40cm_2_scaffold_35753_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9093..9851)
DNA (759bp) protein (253aa)
enoyl-CoA hydratase/isomerase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Enoyl-CoA hydratase/isomerase id=4793456 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus metallidurans genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phenylacetate degradation, enoyl-CoA hydratase paaB
13_1_40cm_2_scaffold_35753_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(9851..11053)
DNA (1203bp) protein (401aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Thiolase id=4205783 bin=GWC2_Syntrophus__56_31 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_2_scaffold_35753_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11082..12509)
DNA (1428bp) protein (476aa)
NAD-dependent aldehyde dehydrogenase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Aldehyde Dehydrogenase id=1250363 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
NAD-dependent aldehyde dehydrogenase
13_1_40cm_2_scaffold_35753_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12506..13321)
DNA (816bp) protein (272aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17) Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L6T3_9BACT
13_1_40cm_2_scaffold_35753_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13328..13927)
DNA (600bp) protein (200aa)
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
TetR-family transcriptional regulator id=1804082 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TetR family transcriptional regulator
13_1_40cm_2_scaffold_35753_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14070..14621
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase ECF-type sigma factor
13_1_40cm_2_scaffold_35753_17
unknown

Not on your lists

14618..15052
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_2_scaffold_35753_18
Musca domestica, Musca, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

15053..15592
DNA (540bp) protein (180aa)
Lectin C-type domain protein {ECO:0000313|EMBL:AFP61768.1}; TaxID=7370 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; M
13_1_40cm_2_scaffold_35753_19
unknown

Not on your lists

comp(15841..16293)
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_2_scaffold_35753_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16503..16814
DNA (312bp) protein (104aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_2_scaffold_35753_trna_1
unknown

Not on your lists

16821..16904
DNA (84bp)
transferRNA
13_1_40cm_2_scaffold_35753_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17287..17715
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADC5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40502.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_2_scaffold_35753_22
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18746..20152
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JJ95_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68870.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
13_1_40cm_2_scaffold_35753_23
unknown

Not on your lists

20239..20958
DNA (720bp) protein (240aa)

This feature has no annotations

13_1_40cm_2_scaffold_35753_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21003..21338
DNA (336bp) protein (112aa)
Phosphoesterase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR81_KORVE
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ABF40619.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_1_40cm_2_scaffold_35753_25
unknown

Not on your lists

21414..21836
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_2_scaffold_35753_26
unknown

Not on your lists

21849..22241
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_2_scaffold_35753_27
unknown

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22298..22660
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_2_scaffold_35753_28
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22688..23128)
DNA (441bp) protein (147aa)
Peptidase families S8 and S53 domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FTS5_STIAD
peptidase families s8 and s53 domain-containing protein
Peptidase families S8 and S53 domain protein {ECO:0000313|EMBL:ADO70877.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigm
13_1_40cm_2_scaffold_35753_29
unknown

Not on your lists

comp(23662..24207)
DNA (546bp) protein (182aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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