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13_1_40cm_2_scaffold_3983

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3983_1
CSP1_5_NC10, NC10, Bacteria

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comp(3..242)
DNA (240bp) protein (80aa)
dioxygenase, ferredoxin subunit id=14430310 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
dioxygenase, ferredoxin subunit Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_2_scaffold_3983_2
unknown

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comp(239..829)
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_2_scaffold_3983_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(996..1373)
DNA (378bp) protein (126aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YGP2_METS5
ferredoxin Tax=RBG_16_Archaea_50_20_curated
4Fe-4S ferredoxin
13_1_40cm_2_scaffold_3983_4
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(1482..2891)
DNA (1410bp) protein (470aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HMC5_PYRSN rbh
phosphopyruvate hydratase
13_1_40cm_2_scaffold_3983_5
unknown

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2952..3365
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_2_scaffold_3983_trna_1
unknown

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3435..3551
DNA (117bp)
transferRNA
13_1_40cm_2_scaffold_3983_6
unknown

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comp(4119..4367)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_2_scaffold_3983_7
unknown

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comp(4377..4943)
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_40cm_2_scaffold_3983_8
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4950..5819)
DNA (870bp) protein (290aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB17221.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
13_1_40cm_2_scaffold_3983_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5791..6576)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ57_NITGG
hypothetical protein withCobQ/CobB/MinD/ParA nucleotide binding domain
Uncharacterized protein {ECO:0000313|EMBL:AFU59138.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_2_scaffold_3983_10
unknown

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comp(6569..8431)
DNA (1863bp) protein (621aa)

This feature has no annotations

13_1_40cm_2_scaffold_3983_11

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8653..9054
DNA (402bp) protein (134aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=uncultured bacterium W5-77b RepID=H9BWG6_9BACT
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AFD03138.1}; TaxID=1131000 species="Bacteria; environmental samples.;" source="uncultured bacterium W5-77b.;"
hypothetical protein
13_1_40cm_2_scaffold_3983_12
unknown

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comp(9124..9525)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_2_scaffold_3983_13
RBG_16_Archaea_50_20_curated, Archaea

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9779..10117
DNA (339bp) protein (113aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein id=14428582 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_2_scaffold_3983_14
unknown

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comp(10057..10311)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_2_scaffold_3983_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10749..11480
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI00036E6245
TRASH domain-containing protein {ECO:0000313|EMBL:ELZ20654.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
RecA-superfamily ATPase implicated in signal transduction-like protein
13_1_40cm_2_scaffold_3983_16
unknown

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11512..11955
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_2_scaffold_3983_17
RBG_16_Archaea_50_20_curated, Archaea

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12128..12679
DNA (552bp) protein (184aa)
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
Putative NADH ubiquinone oxidoreductase, 20 Kd subunit n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6D3 RepID=B3T916_9ARCH
NADH-quinone oxidoreductase, B subunit
13_1_40cm_2_scaffold_3983_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

12676..13158
DNA (483bp) protein (161aa)
F420H2 dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
nuoC; NADH-quinone oxidoreductase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMQ2_NITGG
13_1_40cm_2_scaffold_3983_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

13164..14309
DNA (1146bp) protein (382aa)
nuoD1; NADH-quinone oxidoreductase subunit D (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoD; NADH-quinone oxidoreductase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE89_NITGG
Displaying 20 items

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