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13_1_40cm_2_scaffold_4032

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4032_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2..727
DNA (726bp) protein (242aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKP2_IGNAJ id=5223689 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
etfB; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Electron transfer flavoprotein alpha/beta-subunit
13_1_40cm_2_scaffold_4032_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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724..1698
DNA (975bp) protein (325aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA2_GEMAT
etfA; electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=GWC2_Gemmatimonadetes_71_10_curated
Electron transfer flavoprotein alpha/beta-subunit
13_1_40cm_2_scaffold_4032_3

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1691..3388
DNA (1698bp) protein (566aa)
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=1250187 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1)
Uncharacterized protein {ECO:0000313|EMBL:EQB63050.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
13_1_40cm_2_scaffold_4032_4
unknown

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3559..3777
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_2_scaffold_4032_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3759..4361)
DNA (603bp) protein (201aa)
Multiple antibiotic resistance MarC-related protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU42_KORVE
multiple antibiotic resistance MarC-like protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_1_40cm_2_scaffold_4032_6
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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comp(4358..5182)
DNA (825bp) protein (275aa)
diguanylate cyclase Tax=GWC2_Nitrospirae_56_14_curated
Diguanylate cyclase id=4516555 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
diguanylate cyclase
13_1_40cm_2_scaffold_4032_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5183..6442)
DNA (1260bp) protein (420aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
MoeA domain protein domain I and II
Molybdopterin molybdochelatase id=4217147 bin=GWC2_Syntrophobacterales_56_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_2_scaffold_4032_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6444..6776)
DNA (333bp) protein (111aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_4032_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6918..7517)
DNA (600bp) protein (200aa)
molybdopterin-guanine dinucleotide biosynthesis protein A; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Molybdopterin-guanine dinucleotide biosynthesis protein A
Probable molybdenum cofactor guanylyltransferase id=3389049 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_4032_10
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7520..7933)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003713DB1
Putative CoA-binding protein {ECO:0000313|EMBL:EJE53573.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. C
CoA-binding protein
13_1_40cm_2_scaffold_4032_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7930..8649)
DNA (720bp) protein (240aa)
formate dehydrogenase family accessory protein (FdhD) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative formate dehydrogenase family accessory protein (FdhD) id=3910770 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
formate dehydrogenase
13_1_40cm_2_scaffold_4032_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(8681..9100)
DNA (420bp) protein (140aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
ptpS; 6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L7G6_SAPGL
13_1_40cm_2_scaffold_4032_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(9103..10119)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037E4F05
ABC transporter; K06857 tungstate transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Tungsten transporter ATP binding protein
13_1_40cm_2_scaffold_4032_14

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comp(10112..10807)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381E338
Marine sediment metagenome DNA, contig: S01H4_C01422 {ECO:0000313|EMBL:GAG68588.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_4032_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(10795..11520)
DNA (726bp) protein (242aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_4032_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11534..13075)
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB94_GEMAT rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
13_1_40cm_2_scaffold_4032_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13086..14453
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_4032_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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14462..15904
DNA (1443bp) protein (481aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB87_GEMAT
13_1_40cm_2_scaffold_4032_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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15962..16465
DNA (504bp) protein (168aa)
Putative transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB86_GEMAT
amino acid permease Tax=GWC2_Gemmatimonadetes_71_10_curated
putative transporter
Displaying 19 items

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