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13_1_40cm_2_scaffold_4047

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4047_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2..307
DNA (306bp) protein (102aa)
putative lipoprotein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
putative lipoprotein id=14625651 bin=bin7_NC10_sister species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_4047_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(580..2070)
DNA (1491bp) protein (497aa)
glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] id=14625649 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
13_1_40cm_2_scaffold_4047_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2054..2590)
DNA (537bp) protein (179aa)
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase (Decarboxylating) id=3814766 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_4047_4
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2587..2946)
DNA (360bp) protein (120aa)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFB5_ANASK
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000313|EMBL:ACG73649.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacterac
13_1_40cm_2_scaffold_4047_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2946..4946)
DNA (2001bp) protein (667aa)
transaldolase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] Tax=GWA2_Rokubacteria_73_35_curated
Transaldolase id=3814765 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transaldolase
13_1_40cm_2_scaffold_4047_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4989..5744)
DNA (756bp) protein (252aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31) Tax=GWA2_Rokubacteria_73_35_curated
6-phosphogluconolactonase (6PGL) id=3814683 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
6-phosphogluconolactonase
13_1_40cm_2_scaffold_4047_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5754..7199)
DNA (1446bp) protein (482aa)
carbohydrate kinase FGGY; K00851 gluconokinase [EC:2.7.1.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
carbohydrate kinase; K00851 gluconokinase [EC:2.7.1.12] id=14627818 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
carbohydrate kinase FGGY
13_1_40cm_2_scaffold_4047_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7230..7448
DNA (219bp) protein (73aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3814680 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_4047_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7471..7758
DNA (288bp) protein (96aa)
selenoprotein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
selenoprotein id=4365896 bin=GWC2_Methylomirabilis_70_24 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
selenoprotein
13_1_40cm_2_scaffold_4047_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7807..8001
DNA (195bp) protein (65aa)
Uncharacterized protein id=3814676 bin=GWA2_Methylomirabilis_73_35 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_4047_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7998..9029
DNA (1032bp) protein (344aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4282852 bin=GWC2_Methylomirabilis_70_16 species=Natrialba asiatica genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
13_1_40cm_2_scaffold_4047_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8989..9879)
DNA (891bp) protein (297aa)
membrane protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Membrane protein, putative id=3660581 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_4047_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9906..10310
DNA (405bp) protein (135aa)
Phenylacetic acid degradation-related protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX48_RHOP2
phenylacetic acid degradation-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
phenylacetic acid degradation-like protein
13_1_40cm_2_scaffold_4047_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10311..11192
DNA (882bp) protein (294aa)
3-hydroxyisobutyrate dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=GWA2_Rokubacteria_73_35_curated
3-hydroxyisobutyrate dehydrogenase id=3261978 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces acidiscabies genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
6-phosphogluconate dehydrogenase NAD-binding protein
13_1_40cm_2_scaffold_4047_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11189..12091
DNA (903bp) protein (301aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3261976 bin=GWA2_Methylomirabilis_73_35 species=Rhipicephalus pulchellus genus=Rhipicephalus taxon_order=Ixodida taxon_class=Arachnida phylum=Arthropoda tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-hydroxyisobutyrate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_4047_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12155..12472
DNA (318bp) protein (106aa)
GYD domain superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GYD domain superfamily id=14626792 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
GYD domain superfamily
13_1_40cm_2_scaffold_4047_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12469..12936
DNA (468bp) protein (156aa)
Fe-S-cluster-containing hydrogenase components 2 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase id=14626791 bin=bin7_NC10_sister species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase
13_1_40cm_2_scaffold_4047_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12939..13943
DNA (1005bp) protein (335aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=14626790 bin=bin7_NC10_sister species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_2_scaffold_4047_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13921..14223
DNA (303bp) protein (101aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=14626790 bin=bin7_NC10_sister species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_4047_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14220..16145
DNA (1926bp) protein (642aa)
aldehyde:ferredoxin oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
aldehyde:ferredoxin oxidoreductase id=14626789 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
aldehyde:ferredoxin oxidoreductase
13_1_40cm_2_scaffold_4047_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(16142..17032)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA00_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ATP-dependent carboxylate-amine ligase
13_1_40cm_2_scaffold_4047_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17289..18125
DNA (837bp) protein (279aa)
2-hydroxy-3-oxopropionate reductase; K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase id=4931803 bin=GWC2_Methylomirabilis_70_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_4047_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18122..19153
DNA (1032bp) protein (344aa)
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative acetyltransferase id=4737960 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GCN5-related N-acetyltransferase
13_1_40cm_2_scaffold_4047_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19150..19506
DNA (357bp) protein (119aa)
copper resistance protein CopC; K07156 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Copper resistance protein, copC family id=4737956 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance protein CopC
13_1_40cm_2_scaffold_4047_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

19592..20707
DNA (1116bp) protein (372aa)
hypothetical protein id=14626779 bin=bin7_NC10_sister species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
NADP-dependent oxidoreductase domain protein
Displaying 25 items

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