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13_1_40cm_2_scaffold_431

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_431_1
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1455)
DNA (1455bp) protein (485aa)
Heme-binding protein A n=1 Tax=Clostridium ultunense Esp RepID=M1ZJC6_9CLOT
Heme-binding protein A {ECO:0000313|EMBL:CCQ98663.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
heme-binding protein A (Hemin-binding lipoprotein)
13_1_40cm_2_scaffold_431_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1523..1864)
DNA (342bp) protein (114aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=14428745 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
glutamate dehydrogenase
13_1_40cm_2_scaffold_431_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2029..2877)
DNA (849bp) protein (283aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=14428745 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
glutamate dehydrogenase (NAD(P)(+)) (EC:1.4.1.3)
13_1_40cm_2_scaffold_431_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(2891..3703)
DNA (813bp) protein (271aa)
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
3-oxoadipate enol-lactone hydrolase n=1 Tax=Rhodococcus sp. R1101 RepID=UPI0002EA7094
hydrolase
13_1_40cm_2_scaffold_431_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3711..4388)
DNA (678bp) protein (226aa)
GltK1 id=3247815 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative polar amino acid ABC transporter, inner membrane subunit Tax=GWA2_Rokubacteria_73_35_curated
polar amino acid ABC transporter inner membrane protein
13_1_40cm_2_scaffold_431_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4394..5116)
DNA (723bp) protein (241aa)
gltJ1; protein GltJ1; K10003 glutamate/aspartate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GltJ1 id=2259318 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gltJ1; protein GltJ1
13_1_40cm_2_scaffold_431_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5136..5993)
DNA (858bp) protein (286aa)
gltB1; protein GltB1 (EC:1.4.1.13)
GltI id=3859487 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gltI; protein GltI Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_2_scaffold_431_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6004..6741)
DNA (738bp) protein (246aa)
Phosphate-transporting ATPase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Phosphate-transporting ATPase id=14625833 bin=bin7_NC10_sister species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
ABC transporter
13_1_40cm_2_scaffold_431_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(6741..8003)
DNA (1263bp) protein (421aa)
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] id=14625832 bin=bin7_NC10_sister species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein
13_1_40cm_2_scaffold_431_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8000..8503)
DNA (504bp) protein (168aa)
biotin/lipoyl attachment protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetyl-CoA carboxylase biotin carboxylase subunit, putative id=2259324 bin=GWA2_Methylomirabilis_73_35 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Biotin/lipoic acid binding domain protein
13_1_40cm_2_scaffold_431_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8847..10346)
DNA (1500bp) protein (500aa)
accC; acetyl CoA carboxylase, biotin carboxylase subunit (EC:6.3.4.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
accC; acetyl CoA carboxylase, biotin carboxylase subunit (EC:6.3.4.14)
Acetyl CoA carboxylase, biotin carboxylase subunit id=2259326 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_431_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10343..11350)
DNA (1008bp) protein (336aa)
ABC transporter, substrate-binding component id=14625731 bin=bin7_NC10_sister species=Sporomusa ovata genus=Sporomusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ABC transporter, substrate-binding component Tax=CSP1_6_Rokubacteria
NMT1/THI5 like domain protein
13_1_40cm_2_scaffold_431_13
unknown

Not on your lists

11460..11675
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_2_scaffold_431_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11687..12484)
DNA (798bp) protein (266aa)
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein id=14625732 bin=bin7_NC10_sister species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_431_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12499..13272)
DNA (774bp) protein (258aa)
ABC transporter related protein id=2259336 bin=GWA2_Methylomirabilis_73_35 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter-like protein
13_1_40cm_2_scaffold_431_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13272..14762)
DNA (1491bp) protein (497aa)
Putative benzoate-CoA ligase BzlA (Fragment) id=2259338 bin=GWA2_Methylomirabilis_73_35 species=Clostridia bacterium enrichment culture clone BF genus=unknown taxon_order=unknown taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
benzoate-CoA ligase family Tax=GWA2_Rokubacteria_73_35_curated
benzoate-CoA ligase family
13_1_40cm_2_scaffold_431_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14832..15452)
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KJB96195.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
13_1_40cm_2_scaffold_431_18
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

15718..17022
DNA (1305bp) protein (435aa)
Extracellular solute-binding protein family 1 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1Q8_VARPS
extracellular solute-binding protein family 1 Tax=RBG_16_NC10_65_8_curated
extracellular solute-binding protein
13_1_40cm_2_scaffold_431_19

Not on your lists

17161..17967
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YDT8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD41030.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_431_20
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

17970..18821
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003611883
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=Caldatribacterium californiense
binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_431_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18824..19426)
DNA (603bp) protein (201aa)
CMP/dCMP deaminase, zinc-binding n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UW74_ROSS1
CMP/dCMP deaminase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
CMP/dCMP deaminase zinc-binding protein
13_1_40cm_2_scaffold_431_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19469..19912)
DNA (444bp) protein (148aa)
Ring-cleavage extradiol dioxygenase n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0V491_MYCFO
dioxygenase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein
13_1_40cm_2_scaffold_431_23
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19990..20289)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GF9_BURXL
Uncharacterized protein {ECO:0000313|EMBL:ETX04464.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
antibiotic biosynthesis monooxygenase family protein
13_1_40cm_2_scaffold_431_24
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20418..20876)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI0003456DB9
Uncharacterized protein {ECO:0000313|EMBL:KHF32999.1}; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
acetyltransferase
13_1_40cm_2_scaffold_431_25
unknown

Not on your lists

comp(20921..21076)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_2_scaffold_431_26
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21057..21392)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EM22_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein
13_1_40cm_2_scaffold_431_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21532..21792)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003771AD5
integron gene cassette protein
Integron gene cassette protein {ECO:0000313|EMBL:AEV61869.1}; TaxID=1114970 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
13_1_40cm_2_scaffold_431_28
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(22016..22237)
DNA (222bp) protein (74aa)
integron integrase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Integron integrase id=3719176 bin=GWF2_Methylomirabilis_70_14 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integron integrase
Displaying 28 items

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