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13_1_40cm_2_scaffold_458

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_458_1
RBG_16_Archaea_50_20_curated, Archaea

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1..462
DNA (462bp) protein (154aa)
Hypothetical conserved protein n=1 Tax=uncultured crenarchaeote RepID=H5SJ42_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
putative circadian clock protein, KaiC
13_1_40cm_2_scaffold_458_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(468..1505)
DNA (1038bp) protein (346aa)
Universally conserved protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKD6_HYPBU
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_458_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(1572..2312)
DNA (741bp) protein (247aa)
Putative uncharacterized protein PH0833 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58563_PYRHO
circadian clock protein KaiC Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_2_scaffold_458_4
unknown

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comp(2312..2575)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_2_scaffold_458_5
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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2644..3483
DNA (840bp) protein (280aa)
Isopentenyl phosphate kinase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7A6_METSW
hypothetical protein; K06981 Tax=RBG_16_Bathyarchaeota_57_9_curated
isopentenyl phosphate kinase
13_1_40cm_2_scaffold_458_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(3446..4456)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZVR1_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_2_scaffold_458_7
unknown

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4568..4924
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_2_scaffold_458_8
RBG_16_Archaea_50_20_curated, Archaea

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5117..6490
DNA (1374bp) protein (458aa)
NADP-dependent malic enzyme n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8J1_9EURY
NADP-dependent malic enzyme Tax=RBG_16_Archaea_50_20_curated
NADP-dependent malic enzyme
13_1_40cm_2_scaffold_458_9
RBG_16_Archaea_50_20_curated, Archaea

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6493..7158
DNA (666bp) protein (222aa)
Predicted dinucleotide-binding enzyme n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYQ9_METKA
dinucleotide-binding protein; K06988 Tax=RBG_16_Archaea_50_20_curated
dinucleotide-binding protein
13_1_40cm_2_scaffold_458_10
RBG_16_Archaea_50_20_curated, Archaea

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7172..8374
DNA (1203bp) protein (401aa)
Translation-associated GTPase n=1 Tax=Thermofilum sp. 1910b RepID=S5ZE34_9CREN
GTP binding protein Tax=RBG_16_Archaea_50_20_curated
ychF; translation-associated GTPase
13_1_40cm_2_scaffold_458_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(8654..9172)
DNA (519bp) protein (173aa)
30S ribosomal protein S24e; K02974 small subunit ribosomal protein S24e Tax=RBG_16_Archaea_50_20_curated
Proline-rich protein id=4238835 bin=GWA2_Elusimicrobia_69_24 species=Saccharum officinarum genus=Saccharum taxon_order=Poales taxon_class=Liliopsida phylum=Streptophyta tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
rps24e; 30S ribosomal protein S24e
13_1_40cm_2_scaffold_458_12
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(9169..9603)
DNA (435bp) protein (145aa)
30S ribosomal protein S6e n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS6E_METKA
RPS6A; 30S ribosomal protein S6; K02991 small subunit ribosomal protein S6e Tax=RBG_16_Bathyarchaeota_57_9_curated
RPS6A; 30S ribosomal protein S6
13_1_40cm_2_scaffold_458_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(9668..11446)
DNA (1779bp) protein (593aa)
Probable translation initiation factor IF-2 n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=IF2P_IGNH4 rbh
translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor IF-2
13_1_40cm_2_scaffold_458_14
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(11526..11984)
DNA (459bp) protein (153aa)
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_16_Bathyarchaeota_48_13_curated
nucleoside diphosphate kinase (EC:2.7.4.6)
UPI00034F2350 related cluster n=1 Tax=unknown RepID=UPI00034F2350
13_1_40cm_2_scaffold_458_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12151..12375)
DNA (225bp) protein (75aa)
30S ribosomal protein S28e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IIL4_NITGG
30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e Tax=RBG_13_Bathyarchaeota_38_9_curated
rps28e; 30S ribosomal protein S28e
13_1_40cm_2_scaffold_458_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12372..12761)
DNA (390bp) protein (130aa)
50S ribosomal protein L7Ae n=1 Tax=Pyrobaculum oguniense (strain DSM 13380 / JCM 10595 / TE7) RepID=H6Q701_PYROT
50S ribosomal protein L7Ae; K02936 large subunit ribosomal protein L7Ae Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L7Ae
13_1_40cm_2_scaffold_458_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(13336..13908)
DNA (573bp) protein (191aa)
rpoE`; DNA-directed RNA polymerase, subunit E` (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T895_9ARCH
13_1_40cm_2_scaffold_458_18
RBG_16_Archaea_50_20_curated, Archaea

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comp(13957..14451)
DNA (495bp) protein (165aa)
xanthosine triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RBG_16_Archaea_50_20_curated
Non-canonical purine NTP pyrophosphatase n=3 Tax=Sulfolobus acidocaldarius RepID=M1J1B0_9CREN
nucleoside-triphosphatase
13_1_40cm_2_scaffold_458_19
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(14537..15193)
DNA (657bp) protein (219aa)
O-sialoglycoprotein endopeptidase-related protein; K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] Tax=RBG_16_Bathyarchaeota_48_13_curated
O-sialoglycoprotein endopeptidase, putative n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AIB2_PYRYC
O-sialoglycoprotein endopeptidase
13_1_40cm_2_scaffold_458_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(15175..16164)
DNA (990bp) protein (330aa)
metalloendopeptidase glycoprotease family (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=KAE1_CALMQ
metalloendopeptidase glycoprotease family Tax=RBG_13_Bathyarchaeota_38_9_curated
Displaying 20 items

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