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13_1_40cm_2_scaffold_4503

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4503_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(3..317)
DNA (315bp) protein (105aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
RNA polymerase sigma-70 factor, ECF subfamily id=2777671 bin=GWC2_Chloroflexi_73_18 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_2_scaffold_4503_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(317..736)
DNA (420bp) protein (140aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative uncharacterized protein id=3202763 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative cytochrome c oxidase subunit II
13_1_40cm_2_scaffold_4503_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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781..1344
DNA (564bp) protein (188aa)
heme exporter protein A (EC:3.6.3.41) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Heme exporter protein CcmA n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETP5_METSB
heme exporter protein CcmA
13_1_40cm_2_scaffold_4503_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1344..2021
DNA (678bp) protein (226aa)
heme exporter protein B n=1 Tax=Thermus igniterrae RepID=UPI000381062E
Cytochrome c-type biogenesis protein, heme exporter protein B; K02194 heme exporter protein B Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cytochrome c-type biogenesis protein, heme exporter protein B
13_1_40cm_2_scaffold_4503_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2018..2749
DNA (732bp) protein (244aa)
ABC-type transport system involved in cytochrome c biogenesis, permease component n=2 Tax=Saccharomonospora RepID=H8G973_9PSEU
cytochrome c assembly protein; K02195 heme exporter protein C Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cytochrome c assembly protein
13_1_40cm_2_scaffold_4503_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2822..3253
DNA (432bp) protein (144aa)
cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Cytochrome c-type biogenesis protein ccmE (Cytochrome c maturation protein E) (Heme chaperone ccmE) id=4062404 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmE; cytochrome c-type biogenesis protein CcmE
13_1_40cm_2_scaffold_4503_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3250..5250
DNA (2001bp) protein (667aa)
Cytochrome c-type biogenesis protein cycK n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFW7_9BACT
cycK; cytochrome c-type biogenesis protein cycK Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cycK; cytochrome c-type biogenesis protein cycK
13_1_40cm_2_scaffold_4503_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5247..5783
DNA (537bp) protein (179aa)
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TVU5_9DELT
thiol:disulfide interchange protein DsbE Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
dsbE; thiol:disulfide interchange protein DsbE
13_1_40cm_2_scaffold_4503_9
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5780..6244
DNA (465bp) protein (155aa)
cytochrome C biogenesis protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDCFA
Cytochrome C biosynthesis protein {ECO:0000313|EMBL:EYR64496.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
CcmH family cytochrome c biogenesis protein
13_1_40cm_2_scaffold_4503_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6241..7041
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SI36_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL81471.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp.
13_1_40cm_2_scaffold_4503_trna_1
unknown

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comp(7084..7154)
DNA (71bp)
transferRNA
13_1_40cm_2_scaffold_4503_11
unknown

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7616..7819
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_2_scaffold_4503_12
unknown

Not on your lists

comp(8156..8620)
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_2_scaffold_4503_13
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(8617..9555)
DNA (939bp) protein (313aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3); K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=RBG_16_Chloroflexi_56_11_curated
Ornithine carbamoyltransferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q080_9FIRM
ornithine carbamoyltransferase
13_1_40cm_2_scaffold_4503_14
R_OP11_Levybacteria_42_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(9552..10574)
DNA (1023bp) protein (341aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Levybacteria_42_15_curated
Uncharacterized protein id=4749387 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
hypothetical protein
13_1_40cm_2_scaffold_4503_15
GWB1_OP11_39_12, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(10618..10938)
DNA (321bp) protein (107aa)
adenylate cyclase (EC:4.6.1.1) id=14631937 bin=bin9_gal15 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Uncharacterized protein {ECO:0000313|EMBL:KKQ99029.1}; TaxID=1618574 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_12.;"
hypothetical protein
13_1_40cm_2_scaffold_4503_16
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11089..12378)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036CB975
hypothetical protein Tax=GWF2_Verrucomicrobia_62_7_curated
hypothetical protein
13_1_40cm_2_scaffold_4503_17
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12375..12833)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000382B19E
TadE-like protein Tax=GWF2_Verrucomicrobia_62_7_curated
TadE family protein
13_1_40cm_2_scaffold_4503_18
unknown

Not on your lists

comp(12830..13090)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_2_scaffold_4503_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13512..13703)
DNA (192bp) protein (64aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying 20 items

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