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13_1_40cm_2_scaffold_4972

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4972_1
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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1..666
DNA (666bp) protein (222aa)
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=1250187 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1)
13_1_40cm_2_scaffold_4972_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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797..1780
DNA (984bp) protein (328aa)
Diguanylate cyclase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4BBB8_TURPD
diguanylate cyclase Tax=RBG_16_Acidobacteria_70_10_curated
diguanylate cyclase
13_1_40cm_2_scaffold_4972_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1787..2860)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5G3_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_2_scaffold_4972_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2949..4196)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5G4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89573.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_4972_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4193..4831)
DNA (639bp) protein (213aa)
Multiple antibiotic resistance MarC-related protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU42_KORVE
multiple antibiotic resistance MarC-like protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_1_40cm_2_scaffold_4972_6
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4828..5655)
DNA (828bp) protein (276aa)
Diguanylate cyclase (GGDEF domain) n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGR4_ANADE
diguanylate cyclase Tax=RBG_13_Deltaproteobacteria_61_14_curated
diguanylate cyclase
13_1_40cm_2_scaffold_4972_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5655..6170)
DNA (516bp) protein (172aa)
moeA; molybdopterin biosynthesis protein MoeA; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
MoeA domain protein domain I and II
Molybdopterin molybdochelatase id=4217147 bin=GWC2_Syntrophobacterales_56_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_2_scaffold_4972_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6869..7402)
DNA (534bp) protein (178aa)
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RHH0_MOOTA
molybdopterin-guanine dinucleotide biosynthesis protein B; K03753 molybdopterin-guanine dinucleotide biosynthesis protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
molybdopterin-guanine dinucleotide biosynthesis protein B
13_1_40cm_2_scaffold_4972_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7384..7983)
DNA (600bp) protein (200aa)
molybdopterin-guanine dinucleotide biosynthesis protein A; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Molybdopterin-guanine dinucleotide biosynthesis protein A
Probable molybdenum cofactor guanylyltransferase id=3877310 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_4972_10
unknown

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comp(7988..8839)
DNA (852bp) protein (284aa)

This feature has no annotations

13_1_40cm_2_scaffold_4972_11
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8836..9243)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003713DB1
CoA-binding protein {ECO:0000313|EMBL:KJA10691.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
NAD(P)-binding protein
13_1_40cm_2_scaffold_4972_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9240..9959)
DNA (720bp) protein (240aa)
formate dehydrogenase family accessory protein (FdhD) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative formate dehydrogenase family accessory protein (FdhD) id=4827330 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
formate dehydrogenase family accessory protein FdhD
13_1_40cm_2_scaffold_4972_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10000..10419)
DNA (420bp) protein (140aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
6-pyruvoyl tetrahydropterin synthase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB96_GEMAT
6-pyruvoyl tetrahydropterin synthase and hypothetical protein
13_1_40cm_2_scaffold_4972_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10423..11439)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037E4F05
ABC transporter; K06857 tungstate transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter-related protein
13_1_40cm_2_scaffold_4972_15
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(11432..12145)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381E338
ABC transporter permease; K05773 tungstate transport system permease protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_4972_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12133..12873)
DNA (741bp) protein (247aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91460.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_4972_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12870..14420)
DNA (1551bp) protein (517aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB94_GEMAT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
13_1_40cm_2_scaffold_4972_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14467..15480
DNA (1014bp) protein (338aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_4972_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15477..15812
DNA (336bp) protein (112aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
13_1_40cm_2_scaffold_4972_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15821..17278
DNA (1458bp) protein (486aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB87_GEMAT
13_1_40cm_2_scaffold_4972_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17368..18879
DNA (1512bp) protein (504aa)
Amino acid transporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIE9_SINAD rbh
amino acid transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amino acid transporter
13_1_40cm_2_scaffold_4972_22
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18890..19645
DNA (756bp) protein (252aa)
AlgR/AgrA/LytR family regulatory protein RpfD n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=R9S575_SIMAS
response regulator of the LytR/AlgR family Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
AlgR/AgrA/LytR family regulatory protein RpfD
Displaying 22 items

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