ggKbase home page

13_1_40cm_2_scaffold_485

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_485_1
unknown

Not on your lists

1..414
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_2_scaffold_485_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

421..1950
DNA (1530bp) protein (510aa)
acyl-CoA carboxylase alpha chain (EC:6.4.1.-) Tax=RBG_16_Gemmatimonadetes_66_8_curated
acyl-CoA carboxylase alpha chain (EC:6.4.1.-)
Acyl-CoA carboxylase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z9_GEMAT
13_1_40cm_2_scaffold_485_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1947..3224
DNA (1278bp) protein (426aa)
hypothetical protein; K00599 [EC:2.1.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z8_GEMAT
(Uracil-5)-methyltransferase
13_1_40cm_2_scaffold_485_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3319..3843
DNA (525bp) protein (175aa)
Biotin carboxyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z7_GEMAT
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:AHG90952.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_485_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


3899..4342
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL13_GEMAT
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplM; 50S ribosomal protein L13
13_1_40cm_2_scaffold_485_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


4339..4743
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS9_GEMAT
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsI; 30S ribosomal protein S9
13_1_40cm_2_scaffold_485_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


4916..5797
DNA (882bp) protein (294aa)
30S ribosomal protein S2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein S2
13_1_40cm_2_scaffold_485_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5895..6503
DNA (609bp) protein (203aa)
Elongation factor Ts n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJQ4_THEM7
elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
translation elongation factor Ts (EF-Ts)
13_1_40cm_2_scaffold_485_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6504..7220
DNA (717bp) protein (239aa)
pyrH; uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uridylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z1_GEMAT
Uridylate kinase
13_1_40cm_2_scaffold_485_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7217..7771
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z0_GEMAT
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosome-recycling factor
13_1_40cm_2_scaffold_485_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7773..8513
DNA (741bp) protein (247aa)
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Isoprenyl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y9_GEMAT
Undecaprenyl pyrophosphate synthase
13_1_40cm_2_scaffold_485_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8513..9394
DNA (882bp) protein (294aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y8_GEMAT
13_1_40cm_2_scaffold_485_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9391..10506
DNA (1116bp) protein (372aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RBG_16_Gemmatimonadetes_66_8_curated
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y7_GEMAT
13_1_40cm_2_scaffold_485_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10497..11867
DNA (1371bp) protein (457aa)
peptidase M50 membrane-associated zinc metallopeptidase; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI000377EDC0
membrane-associated zinc metalloprotease
13_1_40cm_2_scaffold_485_15
unknown

Not on your lists

11851..12237
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_2_scaffold_485_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12221..13216)
DNA (996bp) protein (332aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y3_GEMAT
13_1_40cm_2_scaffold_485_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


13288..13545
DNA (258bp) protein (86aa)
30S ribosomal protein S15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y2_GEMAT
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rpsO; 30S ribosomal protein S15
13_1_40cm_2_scaffold_485_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13629..15707
DNA (2079bp) protein (693aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polyribonucleotide nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PNP_GEMAT
Polyribonucleotide nucleotidyltransferase
13_1_40cm_2_scaffold_485_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15993..16460
DNA (468bp) protein (156aa)
Putative S16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT
putative S16B family peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M16 domain protein
13_1_40cm_2_scaffold_485_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16460..16945
DNA (486bp) protein (162aa)
Putative S16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT
putative S16B family peptidase Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M16 domain protein
13_1_40cm_2_scaffold_485_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16942..18054
DNA (1113bp) protein (371aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alanine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X9_GEMAT rbh
alanine dehydrogenase
13_1_40cm_2_scaffold_485_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18081..18890
DNA (810bp) protein (270aa)
Polysaccharide deacetylase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LH57_9BACT
polysaccharide deacetylase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
family 2 glycosyl transferase
13_1_40cm_2_scaffold_485_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18930..19838)
DNA (909bp) protein (303aa)
fabI; enoyl-(acyl carrier protein) reductase (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADQ6_GEMAT
enoyl-(acyl carrier protein) reductase
13_1_40cm_2_scaffold_485_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19916..21139)
DNA (1224bp) protein (408aa)
Dehydrogenase flavoprotein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Dehydrogenase flavoprotein id=3442211 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
Dehydrogenase flavoprotein
13_1_40cm_2_scaffold_485_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(21088..21291)
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_485_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21411..23072
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P1_GEMAT
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AHG87858.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_485_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23227..24210
DNA (984bp) protein (328aa)
Rod shape-determining protein MreB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X8_GEMAT
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RBG_16_Gemmatimonadetes_66_8_curated
mreB; rod shape-determining protein MreB
13_1_40cm_2_scaffold_485_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24215..25066
DNA (852bp) protein (284aa)
Rod shape-determining protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X7_GEMAT
rod shape-determining protein; K03570 rod shape-determining protein MreC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rod shape-determining protein
13_1_40cm_2_scaffold_485_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25063..25560
DNA (498bp) protein (166aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X6_GEMAT
hypothetical membrane protein; K03571 rod shape-determining protein MreD Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rod shape-determining protein MreD
13_1_40cm_2_scaffold_485_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25557..27461
DNA (1905bp) protein (635aa)
Penicillin-binding protein 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X5_GEMAT
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
mrdA; penicillin-binding protein 2
Displaying items 1-30 of 33 in total

View Taxonomy