ggKbase home page

13_1_40cm_2_scaffold_476

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_476_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(1..507)
DNA (507bp) protein (169aa)
copA; copper-exporting P-type ATPase A (EC:3.6.3.-) Tax=RBG_16_Archaea_50_20_curated
copper/silver-translocating P-type ATPase (EC:3.6.3.4)
Copper-exporting P-type ATPase A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ63_NITGG
13_1_40cm_2_scaffold_476_2
unknown

Not on your lists

comp(525..1292)
DNA (768bp) protein (256aa)

This feature has no annotations

13_1_40cm_2_scaffold_476_3
unknown

Not on your lists

comp(2472..3707)
DNA (1236bp) protein (412aa)

This feature has no annotations

13_1_40cm_2_scaffold_476_4
Macaca mulatta, Macaca, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(3724..5148)
DNA (1425bp) protein (475aa)
Basic salivary proline-rich protein 2 (Fragment) n=1 Tax=Macaca mulatta RepID=G7N674_MACMU
Basic salivary proline-rich protein 2 {ECO:0000313|EMBL:EHH20518.1}; Flags: Fragment;; TaxID=9544 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarcho
forkhead-associated protein
13_1_40cm_2_scaffold_476_5
unknown

Not on your lists

comp(5148..5495)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_2_scaffold_476_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

5694..6686
DNA (993bp) protein (331aa)
DNA repair and recombination protein RadA n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU1_9CREN
DNA recombination and repair protein, RecA-like protein Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA repair protein RadA
13_1_40cm_2_scaffold_476_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

6649..7122
DNA (474bp) protein (158aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_476_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(7100..7327)
DNA (228bp) protein (76aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_476_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

7560..8135
DNA (576bp) protein (192aa)
Putative signal transduction protein n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VRB9_9EURY
signal-transduction protein Tax=RBG_16_Archaea_50_20_curated
CBS-domain-containing protein
13_1_40cm_2_scaffold_476_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

8113..9471
DNA (1359bp) protein (453aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RBG_16_Bathyarchaeota_48_13_curated
dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2Q9H6_METFO
13_1_40cm_2_scaffold_476_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

9468..9944
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9Y9W2_AERPE
hypothetical protein; K09122 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_2_scaffold_476_12
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

9957..10574
DNA (618bp) protein (206aa)
Protein Tpen_0748 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=Y748_THEPD
AMMECR1 domain-containing protein
Protein Tpen_0748 {ECO:0000255|HAMAP-Rule:MF_00645}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk
13_1_40cm_2_scaffold_476_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

10584..11765
DNA (1182bp) protein (394aa)
Glycosyltransferase 28 domain protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6Y7_KORCO
glycosyltransferase Tax=RBG_16_Archaea_50_20_curated
glycosyltransferase family 28 protein
13_1_40cm_2_scaffold_476_14
unknown

Not on your lists

11843..12298
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_2_scaffold_476_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

12485..13267
DNA (783bp) protein (261aa)
tRNA(1-methyladenosine) methyltransferase-like methyltransferase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T838_9ARCH
tRNA methyltransferase complex GCD14 subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
type 11 methyltransferase
13_1_40cm_2_scaffold_476_16
unknown

Not on your lists

13264..13563
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_2_scaffold_476_17
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

13640..15073
DNA (1434bp) protein (478aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RBG_16_Bathyarchaeota_48_13_curated
Dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468U2_METBF
13_1_40cm_2_scaffold_476_18
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

15429..16127
DNA (699bp) protein (233aa)
Dolichol-phosphate mannosyltransferase n=1 Tax=Spraguea lophii (strain 42_110) RepID=S7W929_SPRLO
glycosyltransferase group 2 Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
family 2 glycosyl transferase
13_1_40cm_2_scaffold_476_19
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

Not on your lists

comp(16124..16891)
DNA (768bp) protein (256aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeot
Endonuclease NucS n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2L6_9ARCH
hypothetical protein
13_1_40cm_2_scaffold_476_20
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

16943..17518
DNA (576bp) protein (192aa)
ArsR family transcriptional regulator n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B3B52B
UbiE/COQ5 methyltransferase Tax=RBG_16_Bathyarchaeota_48_13_curated
biotin synthesis protein BioC
13_1_40cm_2_scaffold_476_21
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18047..18487)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. CL1 RepID=I3ZUE0_9EURY
pyridoxin-like ECF transporter substrate-specific component Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
Displaying 21 items

View Taxonomy