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13_1_40cm_2_scaffold_5073

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5073_1
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1..339)
DNA (339bp) protein (113aa)
porphobilinogen synthase (EC:4.2.1.24)
Porphobilinogen synthase {ECO:0000313|EMBL:ADV80849.1}; EC=4.2.1.24 {ECO:0000313|EMBL:ADV80849.1};; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" s
Porphobilinogen synthase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UY39_TERSS
13_1_40cm_2_scaffold_5073_2
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(336..1253)
DNA (918bp) protein (306aa)
porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=CG_Syntroph_02
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB01_9DELT
13_1_40cm_2_scaffold_5073_3
CG_Arma_01, Armatimonadetes, Bacteria

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comp(1250..2065)
DNA (816bp) protein (272aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=CG_Arma_01
Uroporphyrin-III C-methyltransferase n=1 Tax=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) RepID=B8J458_DESDA
uroporphyrin-III C-methyltransferase
13_1_40cm_2_scaffold_5073_4
unknown

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2108..2692
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_2_scaffold_5073_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2792..3469)
DNA (678bp) protein (226aa)
Heme exporter protein CcmC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA41_GEMAT
ccmC; heme exporter protein CcmC; K02195 heme exporter protein C Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c assembly protein
13_1_40cm_2_scaffold_5073_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3466..4146)
DNA (681bp) protein (227aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome c-type biogenesis protein CcmB
13_1_40cm_2_scaffold_5073_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4139..4819)
DNA (681bp) protein (227aa)
heme ABC exporter, ATP-binding protein CcmA; K09687 antibiotic transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein id=24485110 bin=RBG_19FT_COMBO_GAL15_69_19 species=Slackia piriformis genus=Slackia taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
cytochrome ABC transporter ATP-binding component
13_1_40cm_2_scaffold_5073_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4806..5174)
DNA (369bp) protein (123aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI35_RHOMR
two-component response regulator protein; K15012 two-component system, response regulator RegA Tax=RBG_16_Gemmatimonadetes_66_8_curated
winged helix family two component transcriptional regulator
13_1_40cm_2_scaffold_5073_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5222..5533)
DNA (312bp) protein (104aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_5073_10
RLO_PLX_64_10, Bacteria

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5766..6986
DNA (1221bp) protein (407aa)
Acetyl-coenzyme A synthetase n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YGD8_9DELT
acetate--CoA ligase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
acetate--CoA ligase
13_1_40cm_2_scaffold_5073_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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6931..7812
DNA (882bp) protein (294aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-CoA synthetase n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JGV5_STRRC
acetate--CoA ligase Tax=RBG_16_Chloroflexi_63_12_curated
13_1_40cm_2_scaffold_5073_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7891..9789)
DNA (1899bp) protein (633aa)
Probable potassium transport system protein kup n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=KUP_MYXXD
kup; potassium uptake protein; K03549 KUP system potassium uptake protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
kup; potassium uptake protein
13_1_40cm_2_scaffold_5073_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9845..10264)
DNA (420bp) protein (140aa)
Vitamin K epoxide reductase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1II45_9CHLR
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Vitamin K epoxide reductase
13_1_40cm_2_scaffold_5073_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(10264..10929)
DNA (666bp) protein (222aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5N9_NITMS id=5103511 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative oxidoreductase
13_1_40cm_2_scaffold_5073_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(10926..11225)
DNA (300bp) protein (100aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_2_scaffold_5073_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11406..11675
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_5073_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11677..12138)
DNA (462bp) protein (154aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_5073_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(12146..12559)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Enterobacteriaceae bacterium LSJC7 RepID=UPI0003759BEF
OsmC-like protein; K07397 putative redox protein Tax=GWC2_Gemmatimonadetes_71_10_curated
yhfA; protein yhfA
13_1_40cm_2_scaffold_5073_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12562..13020)
DNA (459bp) protein (153aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 19 items

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