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13_1_40cm_2_scaffold_5163

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5163_1

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1..537
DNA (537bp) protein (179aa)
Marine sediment metagenome DNA, contig: S06H3_S16432 {ECO:0000313|EMBL:GAI33138.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Putative uncharacterized protein id=4763845 bin=GWA2_Planctomycetia_40_7 species=Aeromonas hydrophila genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
13_1_40cm_2_scaffold_5163_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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534..1628
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG20_9BACT id=1244724 bin=RBG9 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG9 organism_group=Chloroflexi
protein of unknown function DUF1006
Uncharacterized protein {ECO:0000313|EMBL:AHG89171.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_5163_3
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1653..2027)
DNA (375bp) protein (125aa)
DNA-binding helix-turn-helix protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GIM0_9LEPT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EQA46669.1}; TaxID=1049789 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurst
transcriptional regulator
13_1_40cm_2_scaffold_5163_4
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2147..2965
DNA (819bp) protein (273aa)
ykvO; Uncharacterized oxidoreductase YkvO (EC:1.-.-.-)
Uncharacterized oxidoreductase YkvO {ECO:0000313|EMBL:CEG58304.1}; EC=1.-.-.- {ECO:0000313|EMBL:CEG58304.1};; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legio
Uncharacterized protein n=1 Tax=Legionella pneumophila str. Leg01/11 RepID=U1TFD7_LEGPN
13_1_40cm_2_scaffold_5163_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3057..3758)
DNA (702bp) protein (234aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4930082 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_5163_6
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3755..5119)
DNA (1365bp) protein (455aa)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] Tax=CG_Delta_03
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK33_RHOMR
13_1_40cm_2_scaffold_5163_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5116..5517)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMZ5_9GAMM
cupin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cupin
13_1_40cm_2_scaffold_5163_8
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5625..6566)
DNA (942bp) protein (314aa)
Ribulose-bisphosphate carboxylase-like protein rubisco-like protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMZ4_9GAMM
Ribulose-bisphosphate carboxylase-like protein rubisco-like protein {ECO:0000313|EMBL:EAR22593.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospira
ribulose 1,5-bisphosphate carboxylase, large subunit
13_1_40cm_2_scaffold_5163_9
unknown

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6770..6943
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_2_scaffold_5163_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6986..7270
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSM5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57144.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
13_1_40cm_2_scaffold_5163_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7342..9561
DNA (2220bp) protein (740aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKR1_RHOMR
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEN73909.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_1_40cm_2_scaffold_5163_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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9558..11123
DNA (1566bp) protein (522aa)
Beta-lactamase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CY5_SOLUE
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABJ81081.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
13_1_40cm_2_scaffold_5163_13
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11123..12439
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=uncultured nuHF2 cluster bacterium HF0500_31B05 RepID=E7C5Y0_9BACT
hypothetical protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
hypothetical protein
13_1_40cm_2_scaffold_5163_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12528..13454
DNA (927bp) protein (309aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00037BBA6B
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CDM65852.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
13_1_40cm_2_scaffold_5163_15
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13429..13704)
DNA (276bp) protein (92aa)
ThiamineS protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J682_ANAD2
sulfur carrier protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ACL66977.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromy
13_1_40cm_2_scaffold_5163_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13689..14954)
DNA (1266bp) protein (422aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE0_ANADF
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_1_40cm_2_scaffold_5163_17
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(15088..16278)
DNA (1191bp) protein (397aa)
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1)
aspartate aminotransferase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4AF38
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67471.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
13_1_40cm_2_scaffold_5163_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(16394..16951)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT
efp; elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Elongation factor P
13_1_40cm_2_scaffold_5163_19
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17004..17456)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C6B7_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI64305.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_1_40cm_2_scaffold_5163_20
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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comp(17435..18460)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJY4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
hypothetical protein
13_1_40cm_2_scaffold_5163_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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18648..19526
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA91_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_5163_22
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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19746..20159
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XW15_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXU87091.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
13_1_40cm_2_scaffold_5163_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20156..20383)
DNA (228bp) protein (76aa)
ChrB protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIH3_BEII9
ChrB protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Chromate resistance exported protein
13_1_40cm_2_scaffold_5163_24
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20350..21024)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C049_DESTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM22940.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile t
13_1_40cm_2_scaffold_5163_25
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21084..21650)
DNA (567bp) protein (189aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Franki
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI00036AD013
alkylhydroperoxidase
13_1_40cm_2_scaffold_5163_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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21734..22660
DNA (927bp) protein (309aa)
L-proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
proline dehydrogenase (EC:1.5.99.8)
Proline dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV36_9BACT id=5223515 bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_2_scaffold_5163_27
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22816..23166
DNA (351bp) protein (117aa)
Aminotransferase class V n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U8T3_SINMW
classV aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ABR60063.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
Displaying 27 items

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