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13_1_40cm_2_scaffold_5316

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5316_1
unknown

Not on your lists

3..554
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_2_scaffold_5316_2
unknown

Not on your lists

comp(447..1007)
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_2_scaffold_5316_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1062..1955)
DNA (894bp) protein (298aa)
Transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J2H950_9SPHN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC60279.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
LysR family transcriptional regulator
13_1_40cm_2_scaffold_5316_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2101..2970
DNA (870bp) protein (290aa)
UPI0003CEA1B0 related cluster n=1 Tax=unknown RepID=UPI0003CEA1B0
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AHG89825.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_5316_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3290..4150
DNA (861bp) protein (287aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLC9_SINAD rbh
oxidoreductase, aryl-alcohol dehydrogenase like protein
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:AGA29635.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Sin
13_1_40cm_2_scaffold_5316_6
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4421..5476)
DNA (1056bp) protein (352aa)
Predicted oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BF62_SANKS rbh
aryl-alcohol dehydrogenase like protein
Predicted oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:ACZ21358.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" sourc
13_1_40cm_2_scaffold_5316_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5458..5826)
DNA (369bp) protein (123aa)
Aldo/keto reductase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09DP6_STIAD
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:EAU69854.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmat
13_1_40cm_2_scaffold_5316_8
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5906..6313
DNA (408bp) protein (136aa)
Probable transcriptional regulator, MarR family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09DP7_STIAD
MarR family transcriptional regulator
Probable transcriptional regulator, MarR family {ECO:0000313|EMBL:EAU69844.1}; Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADO75270.1}; TaxID=378806 species="Bacteria; Proteobacteria; Del
13_1_40cm_2_scaffold_5316_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6323..6457)
DNA (135bp) protein (45aa)
hypothetical protein; K07065 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_2_scaffold_5316_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6629..7042)
DNA (414bp) protein (138aa)
PilT-like protein n=1 Tax=Beggiatoa sp. PS RepID=A7BR93_9GAMM
PIN domain protein Tax=RBG_16_Acidobacteria_70_10_curated
PIN domain protein
13_1_40cm_2_scaffold_5316_11
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7042..7308)
DNA (267bp) protein (89aa)
HTH domain-containing addiction module Tax=RBG_16_Deltaproteobacteria_71_12_curated
13_1_40cm_2_scaffold_5316_12
unknown

Not on your lists

7502..7729
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_2_scaffold_5316_13
unknown

Not on your lists

7796..8218
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_2_scaffold_5316_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8161..9066
DNA (906bp) protein (302aa)
Transposase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67SQ0_SYMTH
transposase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
transposase
13_1_40cm_2_scaffold_5316_15
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9582..10100
DNA (519bp) protein (173aa)
cupin domain-containing protein Tax=GWA2_Bacteroidetes_30_7_curated
Uncharacterized protein id=3748122 bin=GWF2_Ignavibacteria_35_20 species=Gallaecimonas xiamenensis genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Germin-like protein subfamily 2 member 2 Flags: Precursor
13_1_40cm_2_scaffold_5316_16
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10292..10861
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00037EE634
Uncharacterized protein {ECO:0000313|EMBL:KHD21639.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacch
Porin precursor
13_1_40cm_2_scaffold_5316_17
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10982..13882)
DNA (2901bp) protein (967aa)
Spermine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H945_ANADF rbh
spermine synthase
Spermine synthase {ECO:0000313|EMBL:ABS25241.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source=
13_1_40cm_2_scaffold_5316_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14408..14581)
DNA (174bp) protein (58aa)
acetamidase/formamidase Tax=CSP1_5_NC10
13_1_40cm_2_scaffold_5316_19
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

14667..15434
DNA (768bp) protein (256aa)
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex id=24466811 bin=RBG_19FT_COMBO_GAL15_69_19 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
GntR family transcriptional regulator
13_1_40cm_2_scaffold_5316_20
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

15447..15890
DNA (444bp) protein (148aa)
2-oxoacid:acceptor oxidoreductase subunit delta Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
2-oxoacid:acceptor oxidoreductase subunit delta id=24466812 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
2-oxoacid:acceptor oxidoreductase subunit delta
Displaying 20 items

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