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13_1_40cm_2_scaffold_5597

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5597_1
unknown

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comp(1..462)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_2_scaffold_5597_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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470..3226
DNA (2757bp) protein (919aa)
Alpha-galactosidase-like protein; K07407 alpha-galactosidase [EC:3.2.1.22] Tax=GWC2_Gemmatimonadetes_71_10_curated
alpha-galactosidase n=1 Tax=Haladaptatus paucihalophilus RepID=UPI00035ED4C8
alpha-galactosidase-like protein
13_1_40cm_2_scaffold_5597_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3177..3962)
DNA (786bp) protein (262aa)
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type sugar transport system, permease component id=4214566 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sugar ABC transporter permease
13_1_40cm_2_scaffold_5597_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3994..5850)
DNA (1857bp) protein (619aa)
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Permease component of ABC-type sugar transporter id=4522138 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_5597_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5847..7130)
DNA (1284bp) protein (428aa)
putative ABC transporter substrate binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Permease component of ABC-type sugar transporter id=4214564 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Extracellular solute-binding protein family 1
13_1_40cm_2_scaffold_5597_6
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7127..8194)
DNA (1068bp) protein (356aa)
glycerol-3-phosphate ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00038096C0
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAK72006.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
ugpC; glycerol-3-phosphate transporter ATP-binding subunit
13_1_40cm_2_scaffold_5597_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8201..8653)
DNA (453bp) protein (151aa)
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_5597_8
unknown

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comp(8620..8859)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_2_scaffold_5597_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8873..9346)
DNA (474bp) protein (158aa)
Putative thiol-specific antioxidant protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A982_GEMAT
putative thiol-specific antioxidant protein
Putative thiol-specific antioxidant protein {ECO:0000313|EMBL:BAH39059.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas a
13_1_40cm_2_scaffold_5597_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(9349..10050)
DNA (702bp) protein (234aa)
PF06181 domain protein id=4232743 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_2_scaffold_5597_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10194..10847
DNA (654bp) protein (218aa)
sodA; Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
superoxide dismutase n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003614830 rbh
sodA; Superoxide dismutase
13_1_40cm_2_scaffold_5597_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10850..11050)
DNA (201bp) protein (67aa)
Cysteine-rich CPXCG protein
Cysteine-rich CPXCG protein {ECO:0000313|EMBL:AHG91532.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_5597_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(11047..11502)
DNA (456bp) protein (152aa)
metal-binding protein id=14426788 bin=bin1_lowGC species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
metal-binding protein Tax=CSP1_2_Dadabacteria
CopG family transcriptional regulator
13_1_40cm_2_scaffold_5597_14
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11499..11990)
DNA (492bp) protein (164aa)
histidinol-phosphate phosphatase (EC:3.1.3.15); K05602 histidinol-phosphatase [EC:3.1.3.15] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Histidinol-phosphate phosphatase n=1 Tax=Frankia sp. CN3 RepID=G6HHN8_9ACTO
histidinol-phosphate phosphatase
13_1_40cm_2_scaffold_5597_15
unknown

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12434..12814
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_40cm_2_scaffold_5597_trna_1
unknown

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comp(12912..12984)
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_5597_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13019..14230)
DNA (1212bp) protein (404aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88091.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Probable TPR-domain containing protein id=4362538 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_5597_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14330..15133
DNA (804bp) protein (268aa)
ABC-type tungstate transport system permease component-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type tungstate transport system permease component-like protein id=2315320 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter periplasmic protein
13_1_40cm_2_scaffold_5597_18
unknown

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comp(15117..15515)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_2_scaffold_5597_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(15512..16792)
DNA (1281bp) protein (427aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying 20 items

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