ggKbase home page

13_1_40cm_2_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_6_1
unknown

Not on your lists

3..116
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_2_scaffold_6_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

95..934
DNA (840bp) protein (280aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0S9_CONWI
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_6_3
unknown

Not on your lists

comp(867..1172)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_2_scaffold_6_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1257..2636)
DNA (1380bp) protein (460aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARY8_RUBXD
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:ABG05840.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; R
13_1_40cm_2_scaffold_6_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2737..3429)
DNA (693bp) protein (231aa)
putative uracil-DNA glycosylase (EC:3.2.2.-) Tax=RBG_16_RIF_WS3X_71_46_curated
putative uracil-DNA glycosylase (EC:3.2.2.-)
Putative Uracil-DNA glycosylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAL0_9BACT id=5225461 bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_2_scaffold_6_6
unknown

Not on your lists

comp(3500..3838)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_2_scaffold_6_7
unknown

Not on your lists

comp(4330..4635)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_2_scaffold_6_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4661..5110)
DNA (450bp) protein (150aa)
Alkaline phosphatase (EC:3.1.3.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U944_CYAP2
13_1_40cm_2_scaffold_6_9
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(5107..8001)
DNA (2895bp) protein (965aa)
Alkaline phosphatase (EC:3.1.3.1) Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
Alkaline phosphatase (EC:3.1.3.1)
sna:Snas_4283 metallophosphoesterase id=1246277 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_40cm_2_scaffold_6_10
unknown

Not on your lists

comp(8001..8228)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_2_scaffold_6_11
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8305..10332)
DNA (2028bp) protein (676aa)
High-affinity leucine-specific transport system, periplasmic binding protein LivK {ECO:0000313|EMBL:KFE67748.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cyst
NHL repeat containing protein
Fibronectin type III domain protein id=4056908 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_1_40cm_2_scaffold_6_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(10536..11597)
DNA (1062bp) protein (354aa)
Extracellular repeat protein, HAF family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M895_GEODF
extracellular repeat-containing protein, HAF family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
extracellular repeat-containing protein, HAF family
13_1_40cm_2_scaffold_6_13
unknown

Not on your lists

comp(11730..12392)
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_40cm_2_scaffold_6_14
unknown

Not on your lists

comp(12486..12923)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_2_scaffold_6_15
unknown

Not on your lists

comp(13106..13858)
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_40cm_2_scaffold_6_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13871..15385)
DNA (1515bp) protein (505aa)
WD40-like Beta Propeller n=1 Tax=Bacillus cereus R309803 RepID=C2Q875_BACCE
WD40-like Beta Propeller {ECO:0000313|EMBL:EEK80289.1}; TaxID=526968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus R309803
WD40-like beta Propeller containing protein
13_1_40cm_2_scaffold_6_17
unknown

Not on your lists

comp(15700..15846)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_2_scaffold_6_18
uncultured Gemmatimonadales bacterium HF0770_41L09, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15843..17861)
DNA (2019bp) protein (673aa)
Alpha-tubulin suppressor and related RCC1 domain-containing proteins n=1 Tax=uncultured Gemmatimonadales bacterium HF0770_41L09 RepID=E7C7U8_9BACT
Alpha-tubulin suppressor and related RCC1 domain-containing proteins {ECO:0000313|EMBL:ADI23522.1}; TaxID=723617 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; environmental samples.;" source=
regulator of chromosome condensation RCC1
13_1_40cm_2_scaffold_6_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17959..19968)
DNA (2010bp) protein (670aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X2_CHLAD
regulator of chromosome condensation RCC1 Tax=GWC2_Gemmatimonadetes_71_10_curated
regulator of chromosome condensation, RCC1
13_1_40cm_2_scaffold_6_20
uncultured Gemmatimonadales bacterium HF0770_41L09, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19977..22004)
DNA (2028bp) protein (676aa)
Alpha-tubulin suppressor and related RCC1 domain-containing proteins n=1 Tax=uncultured Gemmatimonadales bacterium HF0770_41L09 RepID=E7C7U9_9BACT
Alpha-tubulin suppressor and related RCC1 domain-containing proteins {ECO:0000313|EMBL:ADI23523.1}; TaxID=723617 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; environmental samples.;" source=
protein kinase
13_1_40cm_2_scaffold_6_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22090..25329)
DNA (3240bp) protein (1080aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative uncharacterized protein id=2961852 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_6_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(25326..25919)
DNA (594bp) protein (198aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_6_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(25998..26657)
DNA (660bp) protein (220aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_6_24
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27083..27988)
DNA (906bp) protein (302aa)
Sphingosine kinase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJK6_ANADE
sphingosine kinase
Sphingosine kinase {ECO:0000313|EMBL:ABC81833.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_1_40cm_2_scaffold_6_25

Not on your lists

comp(27985..29235)
DNA (1251bp) protein (417aa)
L-iditol 2-dehydrogenase (EC:1.1.1.14)
Alcohol dehydrogenase n=1 Tax=uncultured prokaryote RepID=H5SI40_9ZZZZ
Alcohol dehydrogenase {ECO:0000313|EMBL:BAL55826.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
13_1_40cm_2_scaffold_6_26
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29232..30359)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QJP0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX56683.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_40cm_2_scaffold_6_27
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

30459..31778
DNA (1320bp) protein (440aa)
radical sam domain-containing protein id=7202204 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06 rbh
radical sam domain-containing protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
Radical SAM domain protein
13_1_40cm_2_scaffold_6_28
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

31798..33297
DNA (1500bp) protein (500aa)
radical SAM domain-containing protein id=7202203 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06 rbh
radical SAM domain-containing protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
radical SAM domain-containing protein
13_1_40cm_2_scaffold_6_29
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

33304..34596
DNA (1293bp) protein (431aa)
Glycine C-acetyltransferase {ECO:0000313|EMBL:AEU36928.1}; EC=2.3.1.29 {ECO:0000313|EMBL:AEU36928.1};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381A453 rbh
Glycine C-acetyltransferase
13_1_40cm_2_scaffold_6_30
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

34593..35765
DNA (1173bp) protein (391aa)
hypothetical protein id=7202202 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
hypothetical protein
Displaying items 1-30 of 50 in total

View Taxonomy