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13_1_40cm_2_scaffold_600

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_600_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

13_1_40cm_2_scaffold_600_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

134..2437
DNA (2304bp) protein (768aa)
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLQ0_9BACT
13_1_40cm_2_scaffold_600_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2615..3796
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002DD8B16
MFS transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
permease (major facilitator superfamily)
13_1_40cm_2_scaffold_600_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3779..4207)
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative uncharacterized protein id=1778237 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative protein of unknown function DUF55
13_1_40cm_2_scaffold_600_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4242..4727
DNA (486bp) protein (162aa)
mug; G:T/U mismatch-specific DNA glycosylase (EC:3.2.2.-)
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:CBK40096.1}; EC=3.2.2.- {ECO:0000313|EMBL:CBK40096.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira
G:T/U mismatch-specific DNA glycosylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA37_9BACT
13_1_40cm_2_scaffold_600_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4887..7820
DNA (2934bp) protein (978aa)
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
TonB-dependent receptor id=12556886 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB-dependent receptor
13_1_40cm_2_scaffold_600_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

7950..8891
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0770_11C06 RepID=E7C6X9_9BACT rbh
cyclase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
cyclase
13_1_40cm_2_scaffold_600_8
RLO_PLX_64_10, Bacteria

Not on your lists

comp(8943..9383)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI00037D6A5F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_1_40cm_2_scaffold_600_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9507..10979)
DNA (1473bp) protein (491aa)
TPR domain-containing protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2BA99_9PLAN rbh
signal peptide Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
c-type cytochrome precursor
13_1_40cm_2_scaffold_600_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11056..11400)
DNA (345bp) protein (115aa)
TPR repeat-containing protein n=1 Tax=Rhodopirellula baltica WH47 RepID=F2ANY5_RHOBT
signal peptide Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
c-type cytochrome precursor
13_1_40cm_2_scaffold_600_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11471..12814
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020C4_SOLUE
thiol-disulfide isomerase or thioredoxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
thiol-disulfide isomerase or thioredoxin
13_1_40cm_2_scaffold_600_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12881..13771
DNA (891bp) protein (297aa)
PKD n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FS58_METHJ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_2_scaffold_600_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(13808..14641)
DNA (834bp) protein (278aa)
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Type II secretion system protein E (GspE) id=3960247 bin=GWA2_Methylomirabilis_73_35 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
13_1_40cm_2_scaffold_600_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(14652..15554)
DNA (903bp) protein (301aa)
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Type II secretion system protein E (GspE) id=3960247 bin=GWA2_Methylomirabilis_73_35 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type II secretion system protein E
13_1_40cm_2_scaffold_600_15
unknown

Not on your lists

comp(15869..16279)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_2_scaffold_600_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16388..16645
DNA (258bp) protein (86aa)
ThiJ/PfpI domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFM3_ANADF
ThiJ/PfpI domain-containing protein
ThiJ/PfpI domain protein {ECO:0000313|EMBL:ABS27519.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_2_scaffold_600_17
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

16687..17631
DNA (945bp) protein (315aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ABU59851.1}; EC=2.7.6.1 {ECO:0000313|EMBL:ABU59851.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae;
Ribose-phosphate pyrophosphokinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQK5_ROSCS rbh
13_1_40cm_2_scaffold_600_18
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17792..19327)
DNA (1536bp) protein (512aa)
Cytochrome c assembly protein id=4238829 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
cytochrome c assembly protein Tax=GWA2_Elusimicrobia_69_24_curated
putative cytochrome c biogenesis protein
13_1_40cm_2_scaffold_600_19
R_RIF_OD1_13_53_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(19604..20641)
DNA (1038bp) protein (346aa)
UPI0003CE06A3 related cluster n=1 Tax=unknown RepID=UPI0003CE06A3 rbh
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_53_17_curated
hypothetical protein
13_1_40cm_2_scaffold_600_20
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20638..20787)
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000377D0BA
Uncharacterized protein {ECO:0000313|EMBL:KFC96182.1}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella g
TIGR04076 family protein
Displaying 20 items

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