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13_1_40cm_2_scaffold_692

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_692_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2..346
DNA (345bp) protein (115aa)
fabF; 3-oxoacyl-ACP synthase II (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA35_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 2
13_1_40cm_2_scaffold_692_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

377..1111
DNA (735bp) protein (245aa)
MIP family channel protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBS8_9CHLR
MIP family channel protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tonoplast intrinsic protein (Aquaporin)
13_1_40cm_2_scaffold_692_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1034..2014)
DNA (981bp) protein (327aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadace
Delta-aminolevulinic acid dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA37_GEMAT
13_1_40cm_2_scaffold_692_4
RLO_PLX_64_10, Bacteria

Not on your lists

comp(2011..2907)
DNA (897bp) protein (299aa)
hemC; porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Porphobilinogen deaminase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=HEM3_PELCD
hemC; hydroxymethylbilane synthase
13_1_40cm_2_scaffold_692_5
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(2904..3683)
DNA (780bp) protein (260aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=CG_Arma_01
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUK4_RUBXD
13_1_40cm_2_scaffold_692_6
unknown

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3726..4322
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_2_scaffold_692_7
unknown

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comp(4284..4406)
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_2_scaffold_692_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4399..5082)
DNA (684bp) protein (228aa)
Heme exporter protein CcmC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA41_GEMAT
ccmC; heme exporter protein CcmC; K02195 heme exporter protein C Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c assembly protein
13_1_40cm_2_scaffold_692_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5079..5765)
DNA (687bp) protein (229aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome c-type biogenesis protein CcmB
13_1_40cm_2_scaffold_692_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5752..6408)
DNA (657bp) protein (219aa)
ccmA; putative heme exporter protein CcmA (EC:3.6.3.41)
Putative heme exporter protein CcmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA43_GEMAT
heme ABC exporter, ATP-binding protein CcmA; K09687 antibiotic transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_692_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6395..6757)
DNA (363bp) protein (121aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1V3_DESTA id=5223401 bin=16ft_combo_ws3_JS1 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
two-component response regulator protein; K15012 two-component system, response regulator RegA Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
13_1_40cm_2_scaffold_692_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6773..7114)
DNA (342bp) protein (114aa)
Anti-sigma factor antagonist n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FI22_DESAA
anti-sigma-factor antagonist
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_692_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7282..9228
DNA (1947bp) protein (649aa)
acs; acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Acetyl-coenzyme A synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACSA_GEMAT rbh
Acetyl-coenzyme A synthetase
13_1_40cm_2_scaffold_692_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9164..9634)
DNA (471bp) protein (157aa)
Vitamin K epoxide reductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCX5_THET1
VKOR family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
vitamin K epoxide reductase
13_1_40cm_2_scaffold_692_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9634..10305)
DNA (672bp) protein (224aa)
DSBA oxidoreductase n=2 Tax=Chloroflexus RepID=A9WGR1_CHLAA
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
DSBA oxidoreductase
13_1_40cm_2_scaffold_692_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10302..10607)
DNA (306bp) protein (102aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_2_scaffold_692_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10723..10992
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_2_scaffold_692_18
unknown

Not on your lists

comp(11047..11529)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_2_scaffold_692_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11522..11929)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Enterobacteriaceae bacterium LSJC7 RepID=UPI0003759BEF
OsmC-like protein; K07397 putative redox protein Tax=GWC2_Gemmatimonadetes_71_10_curated
OsmC family protein
13_1_40cm_2_scaffold_692_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11931..12461)
DNA (531bp) protein (177aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_692_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12482..13006)
DNA (525bp) protein (175aa)
pgsA2; CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003650ABC
pgsA2; CDP-alcohol phosphatidyltransferase
13_1_40cm_2_scaffold_692_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13022..13480
DNA (459bp) protein (153aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHI7_CORCM
cyclic nucleotide-binding domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
cyclic nucleotide-binding domain-containing protein
13_1_40cm_2_scaffold_692_23
unknown

Not on your lists

13491..13850
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_2_scaffold_692_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13847..14959)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA53_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_1 repeat-containing protein
Displaying 24 items

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