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13_1_40cm_2_scaffold_6781

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_6781_1
unknown

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comp(2..118)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_2_scaffold_6781_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(127..1125)
DNA (999bp) protein (333aa)
homoserine O-succinyltransferase (EC:2.3.1.46)
Bll6280 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GR5_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KGJ66740.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
13_1_40cm_2_scaffold_6781_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1145..2428)
DNA (1284bp) protein (428aa)
O-acetylhomoserine sulfhydrylase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GR4_BRADU
O-acetylhomoserine sulfhydrylase {ECO:0000313|EMBL:BAR54334.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhi
cysD; O-acetylhomoserine sulfhydrylase
13_1_40cm_2_scaffold_6781_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2425..2649)
DNA (225bp) protein (75aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13C54_RHOPS
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE38335.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="
13_1_40cm_2_scaffold_6781_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2642..4042)
DNA (1401bp) protein (467aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J1F5_RHOP2
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABD05705.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhod
13_1_40cm_2_scaffold_6781_6
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4029..4274)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Methylobacterium RepID=B0UC30_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA20781.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
13_1_40cm_2_scaffold_6781_7
R_RIF_OD1_06_33_13, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(4332..5000)
DNA (669bp) protein (223aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated
13_1_40cm_2_scaffold_6781_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5079..6284)
DNA (1206bp) protein (402aa)
putative undecaprenyl-phosphate galactose phosphotransferase RfbP (fragment) (EC:2.7.8.6) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Bacterial sugar transferase domain protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T1A8Q9_9ZZZZ
hypothetical protein
13_1_40cm_2_scaffold_6781_9
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6268..7284)
DNA (1017bp) protein (339aa)
Putative gluconeogenesis factor n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CN89_DESK7
hypothetical protein
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum k
13_1_40cm_2_scaffold_6781_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7281..8204)
DNA (924bp) protein (308aa)
Capsular exopolysaccharide family protein n=1 Tax=Enterococcus faecium EnGen0030 RepID=L2QNS0_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ETX01844.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Tyrosine-protein kinase EpsD
13_1_40cm_2_scaffold_6781_11
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(8201..9187)
DNA (987bp) protein (329aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6C8_LEPCP
Peptidoglycan-binding lysin domain-containing protein; K02450 general secretion pathway protein A Tax=RBG_16_Acidobacteria_68_9_curated
peptidoglycan-binding domain-containing protein
13_1_40cm_2_scaffold_6781_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9245..10768)
DNA (1524bp) protein (508aa)
Polysaccharide chain length determinant protein n=2 Tax=Geobacter metallireducens RepID=Q39VP4_GEOMG
chain length determinant protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
polysaccharide chain length determinant protein
13_1_40cm_2_scaffold_6781_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(10771..11400)
DNA (630bp) protein (210aa)
Capsule polysaccharide export protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QZN8_9DELT
periplasmic protein involved in polysaccharide export Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
polysaccharide biosynthesis/export protein
13_1_40cm_2_scaffold_6781_14
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11419..11991)
DNA (573bp) protein (191aa)
Transcription antitermination protein NusG (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BE69_9ZZZZ
NusG antitermination factor Tax=RBG_13_Nitrospirae_41_22_curated
transcription antitermination protein
13_1_40cm_2_scaffold_6781_15
unknown

Not on your lists

comp(12106..12405)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_2_scaffold_6781_16
unknown

Not on your lists

comp(12402..12692)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_2_scaffold_6781_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12689..13396)
DNA (708bp) protein (236aa)
response regulator receiver/ANTAR domain-containing protein id=14429095 bin=bin3_NC10 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
response regulator receiver/ANTAR domain-containing protein Tax=CSP1_5_NC10
response regulator receiver
13_1_40cm_2_scaffold_6781_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(13527..14159)
DNA (633bp) protein (211aa)
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
two component LuxR family transcriptional regulator Tax=CSP1_5_NC10
LuxR family transcriptional regulator
13_1_40cm_2_scaffold_6781_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14260..14562)
DNA (303bp) protein (101aa)
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
two component LuxR family transcriptional regulator Tax=CSP1_5_NC10
response regulator
Displaying 19 items

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