ggKbase home page

13_1_40cm_2_scaffold_6612

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_6612_1
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(444..1022)
DNA (579bp) protein (193aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I id=3678561 bin=GWC2_Nitrospirae-rel_56_14 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
13_1_40cm_2_scaffold_6612_2
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

1114..2235
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0B0_METPS
nitrogenase subunit NifH (ATPase)-like protein Tax=CG_Caldi_01
hypothetical protein
13_1_40cm_2_scaffold_6612_3
unknown

Not on your lists

2265..2516
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_2_scaffold_6612_4
unknown

Not on your lists

2547..2636
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_2_scaffold_6612_5
unknown

Not on your lists

comp(2707..3132)
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_40cm_2_scaffold_6612_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(3270..4124)
DNA (855bp) protein (285aa)
Transcription regulator AsnC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCR7_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIF84064.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Ni
13_1_40cm_2_scaffold_6612_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4218..4721
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQS6_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH85797.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_2_scaffold_6612_8
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4739..5158
DNA (420bp) protein (140aa)
Putative hydrolase or acyltransferase n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4TD74_9MYCO
Alpha/beta hydrolase {ECO:0000313|EMBL:KKC01251.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycobact
alpha/beta hydrolase
13_1_40cm_2_scaffold_6612_9
unknown

Not on your lists

comp(5644..6012)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_2_scaffold_6612_10
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6335..6775
DNA (441bp) protein (147aa)
Isochorismatase hydrolase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QTC5_9DELT
Isochorismatase hydrolase {ECO:0000313|EMBL:EPX59908.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="
isochorismatase hydrolase
13_1_40cm_2_scaffold_6612_11
unknown

Not on your lists

comp(6860..7117)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_2_scaffold_6612_12
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7387..7746
DNA (360bp) protein (120aa)
Transcriptional regulator, HxlR family n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GG12_METPE
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACL16086.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="
13_1_40cm_2_scaffold_6612_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(7801..8418)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium CSL11 RepID=G4WVC2_9BACT
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_1_40cm_2_scaffold_6612_14
unknown

Not on your lists

comp(8526..8642)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_2_scaffold_6612_15
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

8868..10892
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MWA1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB65605.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
5-oxoprolinase
13_1_40cm_2_scaffold_6612_16
unknown

Not on your lists

11076..11624
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_2_scaffold_6612_17
RIFOXYA1_FULL_Bacteriovorax_38_20_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

12238..13128
DNA (891bp) protein (297aa)
SAM-dependent methyltransferase (EC:2.1.1.-) Tax=RIFOXYA1_FULL_Bacteriovorax_38_20_curated
SAM-dependent methyltransferase (EC:2.1.1.-)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00037B5856
13_1_40cm_2_scaffold_6612_18
unknown

Not on your lists

13178..14059
DNA (882bp) protein (294aa)

This feature has no annotations

13_1_40cm_2_scaffold_6612_19
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

14164..14562
DNA (399bp) protein (133aa)
N-methylhydantoinase B (EC:3.5.2.14)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035EC520
Uncharacterized protein {ECO:0000313|EMBL:EQB65606.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
13_1_40cm_2_scaffold_6612_20
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

14559..15698
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035EC520
Uncharacterized protein {ECO:0000313|EMBL:EQB65606.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
hyuB; hydantoin utilization protein B
13_1_40cm_2_scaffold_6612_21
RLO_PLX_64_10, Bacteria

Not on your lists

15866..17752
DNA (1887bp) protein (629aa)
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
indolepyruvate ferredoxin oxidoreductase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B62135
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
13_1_40cm_2_scaffold_6612_22
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

17877..19409
DNA (1533bp) protein (511aa)
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
indolepyruvate ferredoxin oxidoreductase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B62135
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Displaying 22 items

View Taxonomy