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13_1_40cm_2_scaffold_6625

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_6625_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..641)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Burkholderia RepID=A4JNN9_BURVG id=5225348 bin=16ft_combo_ws3_JS1 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
protein of unknown function DUF1611
Uncharacterized protein {ECO:0000313|EMBL:AHG90293.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_6625_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(638..1729)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ASE2_AZOBR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function UPF0118
13_1_40cm_2_scaffold_6625_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1777..2541)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L5_GEMAT
hypothetical protein; K03969 phage shock protein A Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_2_scaffold_6625_4
unknown

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comp(2548..2919)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_2_scaffold_6625_5
unknown

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comp(2966..3247)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_2_scaffold_6625_6
unknown

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comp(3247..3486)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_2_scaffold_6625_7
unknown

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comp(3483..3614)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_2_scaffold_6625_8
unknown

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comp(3734..4027)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_2_scaffold_6625_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4062..6911)
DNA (2850bp) protein (950aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UvrABC system protein A
13_1_40cm_2_scaffold_6625_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7022..7945
DNA (924bp) protein (308aa)
hypothetical protein, partial n=1 Tax=Herbaspirillum lusitanum RepID=UPI000369E5C2
TPR repeat-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_2_scaffold_6625_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7942..8448
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WM42_MYCKA
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
lppD; Conserved protein of unknown function, putative lipoprotein LppD (part 2)
13_1_40cm_2_scaffold_6625_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8445..9947
DNA (1503bp) protein (501aa)
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transglutaminase-like protein id=2535659 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
transglutaminase domain-containing protein
13_1_40cm_2_scaffold_6625_13
unknown

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9944..10087
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_2_scaffold_6625_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10032..10655
DNA (624bp) protein (208aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K8_GEMAT
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_6625_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10652..12343
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K7_GEMAT
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_6625_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12344..12832)
DNA (489bp) protein (163aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_6625_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12894..13400)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_6625_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13393..13947)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K3_GEMAT
hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome C biogenesis protein
13_1_40cm_2_scaffold_6625_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14290..15927)
DNA (1638bp) protein (546aa)
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K2_GEMAT
ccmF; cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF Tax=GWC2_Gemmatimonadetes_71_10_curated
ccmF; cytochrome c-type biogenesis protein CcmF
13_1_40cm_2_scaffold_6625_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15928..16332)
DNA (405bp) protein (135aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K1_GEMAT
ccmE; cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CcmE/CycJ protein
13_1_40cm_2_scaffold_6625_21

Not on your lists

comp(16340..16807)
DNA (468bp) protein (156aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SIR4_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL56050.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
hypothetical protein
13_1_40cm_2_scaffold_6625_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16804..18279)
DNA (1476bp) protein (492aa)
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase {ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|SAAS:SAAS00029376};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" so
Glycerol kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K0_GEMAT
13_1_40cm_2_scaffold_6625_23
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(18276..19082)
DNA (807bp) protein (269aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:00
Methylthioribose-1-phosphate isomerase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G9P5_CHLAD
Displaying 23 items

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