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13_1_40cm_2_scaffold_667

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_667_1
unknown

Not on your lists

1..300
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_2_scaffold_667_2
unknown

Not on your lists

comp(339..782)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_2_scaffold_667_3
unknown

Not on your lists

comp(1090..1833)
DNA (744bp) protein (248aa)

This feature has no annotations

13_1_40cm_2_scaffold_667_4
RBG_19FT_COMBO_OP11_39_10_curated, Microgenomates, Bacteria

Not on your lists

comp(2117..2368)
DNA (252bp) protein (84aa)
hypothetical protein Tax=RBG_19FT_COMBO_OP11_39_10_curated
13_1_40cm_2_scaffold_667_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2610..3563
DNA (954bp) protein (318aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_2_scaffold_667_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

3907..4476
DNA (570bp) protein (190aa)
hypothetical protein
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_667_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

4486..5187
DNA (702bp) protein (234aa)
ribose 5-phosphate isomerase A; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RBG_16_Archaea_50_20_curated
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=RPIA_META3
13_1_40cm_2_scaffold_667_8
unknown

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comp(5229..5564)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_2_scaffold_667_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5893..7098)
DNA (1206bp) protein (402aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_2_scaffold_667_10
unknown

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comp(7508..7639)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_2_scaffold_667_11
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

7700..8401
DNA (702bp) protein (234aa)
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RBG_13_Bathyarchaeota_52_12_curated
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=PGK_METJA
13_1_40cm_2_scaffold_667_trna_1
unknown

Not on your lists

8458..8540
DNA (83bp)
transferRNA
13_1_40cm_2_scaffold_667_12
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8544..10097)
DNA (1554bp) protein (518aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZS80_THEET
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EGD53148.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobac
EmrB/QacA family drug resistance transporter
13_1_40cm_2_scaffold_667_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

10575..10943
DNA (369bp) protein (123aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_667_14
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

11087..11470
DNA (384bp) protein (128aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRJ5_9BACT
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:BAL58712.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
manganese transport transcriptional regulator
13_1_40cm_2_scaffold_667_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

11605..12924
DNA (1320bp) protein (440aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) Tax=RBG_13_Bathyarchaeota_46_16b_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY7_NITGG
13_1_40cm_2_scaffold_667_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

12982..13164
DNA (183bp) protein (61aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_667_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13192..14232)
DNA (1041bp) protein (347aa)
mRNA 3'-end processing factor n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3Z8_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_667_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14192..14575)
DNA (384bp) protein (128aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_2_scaffold_667_19
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

14667..14990
DNA (324bp) protein (108aa)
Alba, DNA/RNA-binding protein, archaeal (Fragment) n=1 Tax=mine drainage metagenome RepID=T1ALV4_9ZZZZ
DNA/RNA-binding protein AlbA; K03622 archaea-specific DNA-binding protein Tax=RBG_16_Bathyarchaeota_57_9_curated
DNA/RNA-binding protein Alba
13_1_40cm_2_scaffold_667_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

15060..16406
DNA (1347bp) protein (449aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19) Tax=RBG_13_Bathyarchaeota_46_16b_curated
4-aminobutyrate aminotransferase (EC:2.6.1.17 2.6.1.11 2.6.1.13)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037E812F
13_1_40cm_2_scaffold_667_21
unknown

Not on your lists

16926..17618
DNA (693bp) protein (231aa)

This feature has no annotations

13_1_40cm_2_scaffold_667_22
unknown

Not on your lists

comp(17834..18091)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_2_scaffold_667_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(18443..18883)
DNA (441bp) protein (147aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_667_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(18902..20038)
DNA (1137bp) protein (379aa)
OB-fold nucleic acid binding domain protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C0F2_METCG
replication factor A; K07466 replication factor A1 Tax=RBG_16_Archaea_50_20_curated
OB-fold nucleic acid binding domain-containing protein
13_1_40cm_2_scaffold_667_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20045..22867)
DNA (2823bp) protein (941aa)
ATP-dependent DNA helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_16_Archaea_50_20_curated
ATP-dependent DNA helicase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSN3_METAC
ATP-dependent DNA helicase
13_1_40cm_2_scaffold_667_26
unknown

Not on your lists

22870..22977
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_2_scaffold_667_27
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

23612..24217
DNA (606bp) protein (202aa)
Putative phosphoesterase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZ62_METPS
phosphoesterase; K06953 Tax=RBG_16_Bathyarchaeota_48_13_curated
putative phosphoesterase
Displaying 28 items

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