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13_1_40cm_2_scaffold_7131

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_7131_1
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..1061)
DNA (1059bp) protein (353aa)
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
two-component hybrid sensor and regulator
13_1_40cm_2_scaffold_7131_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1555..2337)
DNA (783bp) protein (261aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_7131_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2340..3443)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB84_GEMAT
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase-like, ParA/MinD
13_1_40cm_2_scaffold_7131_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3496..3849)
DNA (354bp) protein (118aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_7131_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

4045..4833
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=2 Tax=Dehalococcoides mccartyi RepID=D3SKA9_DEHSG
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
13_1_40cm_2_scaffold_7131_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4849..6315)
DNA (1467bp) protein (489aa)
hypothetical protein; K13049 carboxypeptidase PM20D1 [EC:3.4.17.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBZ2_MYXSD
hypothetical protein
13_1_40cm_2_scaffold_7131_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

6392..7141
DNA (750bp) protein (250aa)
Zn-dependent hydrolase, glyoxylase id=24456897 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Zn-dependent hydrolase, glyoxylase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
beta-lactamase
13_1_40cm_2_scaffold_7131_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7138..8151)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB85_GEMAT
hypothetical protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphoesterase RecJ domain protein
13_1_40cm_2_scaffold_7131_9
unknown

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comp(8248..8658)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_2_scaffold_7131_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8803..9510)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037D1CB6
amino acid permease Tax=GWC2_Gemmatimonadetes_71_10_curated
amino acid permease
13_1_40cm_2_scaffold_7131_11
unknown

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9667..9933
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_2_scaffold_7131_12
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10299..11120)
DNA (822bp) protein (274aa)
AlgR/AgrA/LytR family regulatory protein RpfD n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=R9S575_SIMAS
response regulator of the LytR/AlgR family Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
AlgR/AgrA/LytR family regulatory protein RpfD
13_1_40cm_2_scaffold_7131_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11142..12578)
DNA (1437bp) protein (479aa)
Amino acid permease-associated region n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T9A8_BURPP
amino acid transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amino acid permease-associated protein
13_1_40cm_2_scaffold_7131_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12665..14128)
DNA (1464bp) protein (488aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB87_GEMAT
13_1_40cm_2_scaffold_7131_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14137..14472)
DNA (336bp) protein (112aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
13_1_40cm_2_scaffold_7131_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14469..15557)
DNA (1089bp) protein (363aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_7131_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15568..17067
DNA (1500bp) protein (500aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB94_GEMAT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
13_1_40cm_2_scaffold_7131_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17064..17786
DNA (723bp) protein (241aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_7131_19

Not on your lists

17774..18469
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381E338
Marine sediment metagenome DNA, contig: S01H4_C01422 {ECO:0000313|EMBL:GAG68588.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_7131_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19025..19420
DNA (396bp) protein (132aa)
ABC transporter; K06857 tungstate transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter ATP-binding protein; K06857 tungstate transport system ATP-binding protein id=14430717 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
molybdate ABC transporter ATPase
13_1_40cm_2_scaffold_7131_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19423..19842
DNA (420bp) protein (140aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSV1_9SPHI
6-pyruvoyl tetrahydrobiopterin synthase
13_1_40cm_2_scaffold_7131_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19964..20683
DNA (720bp) protein (240aa)
formate dehydrogenase family accessory protein (FdhD) Tax=GWC2_Gemmatimonadetes_71_10_curated
formate dehydrogenase
Formate dehydrogenase family accessory protein FdhD id=4638662 bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_2_scaffold_7131_23
unknown

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20680..20757
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 23 items

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