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13_1_40cm_2_scaffold_656

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_656_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(45..1280)
DNA (1236bp) protein (412aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT rbh
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_1_40cm_2_scaffold_656_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1289..2494)
DNA (1206bp) protein (402aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H7_GEMAT
putative ABC transporter permease protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter permease protein
13_1_40cm_2_scaffold_656_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2582..3811)
DNA (1230bp) protein (410aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
MacB-like periplasmic core domain protein
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG90437.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_656_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3815..5053)
DNA (1239bp) protein (413aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H7_GEMAT
putative ABC transporter permease protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter permease protein
13_1_40cm_2_scaffold_656_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5054..5785)
DNA (732bp) protein (244aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_656_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5782..7104)
DNA (1323bp) protein (441aa)
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H9_GEMAT
secretion protein HlyD family protein; K02005 HlyD family secretion protein Tax=GWC2_Gemmatimonadetes_71_10_curated
efflux transporter, RND family, MFP subunit
13_1_40cm_2_scaffold_656_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7124..8632)
DNA (1509bp) protein (503aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I0_GEMAT
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane efflux protein
13_1_40cm_2_scaffold_656_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8717..9388)
DNA (672bp) protein (224aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_2_scaffold_656_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9385..9840)
DNA (456bp) protein (152aa)
Uncharacterized protein (Fragment) n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MQG3_9ACTO
Creatininase
Creatininase {ECO:0000313|EMBL:AHG90443.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_656_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10102..14130
DNA (4029bp) protein (1343aa)
Putative two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I2_GEMAT
putative two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative two-component histidine kinase
13_1_40cm_2_scaffold_656_11
unknown

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14226..15584
DNA (1359bp) protein (453aa)

This feature has no annotations

13_1_40cm_2_scaffold_656_12
unknown

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15595..16131
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_40cm_2_scaffold_656_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16206..17447
DNA (1242bp) protein (414aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=14628995 bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
13_1_40cm_2_scaffold_656_14
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17367..17705)
DNA (339bp) protein (113aa)
Chaperonin csaA n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NYJ3_9RHOB
Chaperonin csaA {ECO:0000313|EMBL:EAV42189.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain
export-related chaperone CsaA
13_1_40cm_2_scaffold_656_15
unknown

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17827..18486
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_40cm_2_scaffold_656_16
unknown

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18877..19530
DNA (654bp) protein (218aa)

This feature has no annotations

13_1_40cm_2_scaffold_656_17
unknown

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19532..21043
DNA (1512bp) protein (504aa)

This feature has no annotations

13_1_40cm_2_scaffold_656_18
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21044..24133)
DNA (3090bp) protein (1030aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CSP1_8_Deltaproteobacteria
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14623092 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
acriflavin resistance protein
13_1_40cm_2_scaffold_656_19
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(24130..25269)
DNA (1140bp) protein (380aa)
Efflux transporter, RND family, MFP subunit id=3720835 bin=GWC2_Nitrospirae_57_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=GWC2_Nitrospirae_57_13_curated
RND family efflux pump membrane fusion lipoprotein
13_1_40cm_2_scaffold_656_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

25310..26884
DNA (1575bp) protein (525aa)
Mg chelatase-related chaperone ATPase; K07391 magnesium chelatase family protein id=14425921 bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Mg chelatase-related chaperone ATPase; K07391 magnesium chelatase family protein Tax=CSP1_2_Dadabacteria
comM; competence ATPase ComM
13_1_40cm_2_scaffold_656_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

27179..27529
DNA (351bp) protein (117aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_656_22
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(27536..29533)
DNA (1998bp) protein (666aa)
Sodium/hydrogen exchanger n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWN3_9BACT
sodium/hydrogen exchanger family/TrkA domain protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
potassium transporter KefB
13_1_40cm_2_scaffold_656_23
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

29564..30439
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035CE211
transporter, MscS family Tax=CG_OP9-01
mechanosensitive ion channel protein MscS
13_1_40cm_2_scaffold_656_24
unknown

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comp(30419..30544)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 24 items

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