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13_1_40cm_2_scaffold_817

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_817_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(134..718)
DNA (585bp) protein (195aa)
thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
tdk; thymidine kinase; K00857 thymidine kinase [EC:2.7.1.21] id=12556009 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thymidine kinase (EC:2.7.1.21)
13_1_40cm_2_scaffold_817_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(720..1286)
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI28_9BACT
translation elongation factor P (EF-P); K02356 elongation factor P Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
translation elongation factor P (EF-P)
13_1_40cm_2_scaffold_817_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1345..1767
DNA (423bp) protein (141aa)
Heat shock protein Hsp20 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
heat shock protein Hsp20; K13993 HSP20 family protein id=12556011 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Heat shock protein Hsp20
13_1_40cm_2_scaffold_817_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

1867..3078
DNA (1212bp) protein (404aa)
degQ; protease DegQ (EC:3.4.21.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
degQ; protease DegQ (EC:3.4.21.-)
Serine protease, HtrA/DegQ/DegS family n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI27_9BACT rbh
13_1_40cm_2_scaffold_817_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3221..4477)
DNA (1257bp) protein (419aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
thrC; threonine synthase (TS) (EC:4.2.3.1) id=12557658 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
threonine synthase
13_1_40cm_2_scaffold_817_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4474..5511)
DNA (1038bp) protein (346aa)
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036E0E82
homoserine dehydrogenase
13_1_40cm_2_scaffold_817_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5825..7660)
DNA (1836bp) protein (612aa)
ferredoxin--nitrite reductase (EC:1.7.7.1); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Ferredoxin--nitrite reductase id=4066346 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
ferredoxin--nitrite reductase
13_1_40cm_2_scaffold_817_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8865..9584)
DNA (720bp) protein (240aa)
uroporphyrin-III C-methyltransferase; K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] Tax=RIFCSPLOWO2_02_FULL
Uroporphyrin-III C-methyltransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGD8_ANADF
uroporphyrin-III C-methyltransferase
13_1_40cm_2_scaffold_817_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

10055..12688
DNA (2634bp) protein (878aa)
Peptidase M1, membrane alanine aminopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISU7_KORVE
peptidase M1, membrane alanine aminopeptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
peptidase M1, membrane alanine aminopeptidase
13_1_40cm_2_scaffold_817_10
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

12755..13477
DNA (723bp) protein (241aa)
Ankyrin n=1 Tax=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) RepID=C3NIT9_SULIN
ankyrin
Ankyrin {ECO:0000313|EMBL:ACP49049.1}; TaxID=419942 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus islandicus (strain Y.N.15.51 / Yellowst
13_1_40cm_2_scaffold_817_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(13492..14142)
DNA (651bp) protein (217aa)
DNA-3-methyladenine glycosylase (EC:3.2.2.21); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Mpg; 3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] id=12556013 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA-3-methyladenine glycosylase (EC:3.2.2.21)
13_1_40cm_2_scaffold_817_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14204..15538)
DNA (1335bp) protein (445aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_2_scaffold_817_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15522..18500)
DNA (2979bp) protein (993aa)
Excinuclease ABC, A subunit n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI25_9BACT rbh
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
excinuclease ABC subunit A
13_1_40cm_2_scaffold_817_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

18693..19913
DNA (1221bp) protein (407aa)
Sulfite oxidase and related enzymes n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IC65_AZOC5
sulfite oxidase SoxC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
sulfite oxidase and related enzymes
13_1_40cm_2_scaffold_817_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

19897..20475
DNA (579bp) protein (193aa)
Cytochrome c n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DFE1_9BURK
cytochrome c, class I Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
sulfite oxidase cytochrome subunit
13_1_40cm_2_scaffold_817_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

20472..20900
DNA (429bp) protein (143aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_2_scaffold_817_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(21250..21666)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9P2_METTP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_2_scaffold_817_18
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(21694..22035)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJA0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84762.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_2_scaffold_817_trna_1
unknown

Not on your lists

22094..22166
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_817_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(22480..22713)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000376EC0A
PadR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PadR family transcriptional regulator
13_1_40cm_2_scaffold_817_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23006..23755)
DNA (750bp) protein (250aa)
Gll1201 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
permease
Permease {ECO:0000313|EMBL:AHG88496.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 21 items

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