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13_1_40cm_2_scaffold_810

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_810_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3..1358
DNA (1356bp) protein (452aa)
sugar ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Permease component of ABC-type sugar transporter id=4522138 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
binding-protein-dependent transporters inner membrane component
13_1_40cm_2_scaffold_810_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1351..2184
DNA (834bp) protein (278aa)
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type sugar transport system, permease component id=4214566 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sugar ABC transporter permease
13_1_40cm_2_scaffold_810_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2243..5011)
DNA (2769bp) protein (923aa)
Alpha-galactosidase-like protein; K07407 alpha-galactosidase [EC:3.2.1.22] Tax=GWC2_Gemmatimonadetes_71_10_curated
alpha-galactosidase n=1 Tax=Haladaptatus paucihalophilus RepID=UPI00035ED4C8
Alpha-galactosidase-like protein
13_1_40cm_2_scaffold_810_4
unknown

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5016..5579
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_2_scaffold_810_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5591..7147
DNA (1557bp) protein (519aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A980_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS sensor protein
13_1_40cm_2_scaffold_810_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7144..7812
DNA (669bp) protein (223aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A978_GEMAT
OmpR family two-component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator domain-containing protein
13_1_40cm_2_scaffold_810_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7814..9259
DNA (1446bp) protein (482aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A977_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-binding region ATPase domain protein
13_1_40cm_2_scaffold_810_8
unknown

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9925..10719
DNA (795bp) protein (265aa)

This feature has no annotations

13_1_40cm_2_scaffold_810_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10896..11576
DNA (681bp) protein (227aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tonB; putative TonB protein
13_1_40cm_2_scaffold_810_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11615..12364
DNA (750bp) protein (250aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A975_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RBG_16_Gemmatimonadetes_66_8_curated
MotA/TolQ/ExbB proton channel
13_1_40cm_2_scaffold_810_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12345..12806
DNA (462bp) protein (154aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A974_GEMAT
putative biopolymer transport protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Biopolymer transport protein ExbD/TolR
13_1_40cm_2_scaffold_810_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12810..13229
DNA (420bp) protein (140aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A973_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=RBG_16_Gemmatimonadetes_66_8_curated
Biopolymer transport protein ExbD/TolR
13_1_40cm_2_scaffold_810_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13327..14076
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A972_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39049.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_2_scaffold_810_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14116..16248
DNA (2133bp) protein (711aa)
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Pyrophosphate-energized proton pump
K(+)-insensitive pyrophosphate-energized proton pump id=1842624 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum rbh
13_1_40cm_2_scaffold_810_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

16241..17743
DNA (1503bp) protein (501aa)
Putative permease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A971_GEMAT
putative permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
putative permease
13_1_40cm_2_scaffold_810_16
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

17740..19035
DNA (1296bp) protein (432aa)
Sodium:dicarboxylate symporter family protein id=3114362 bin=GWA2_Ignavibacteria_55_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sodium:dicarboxylate symporter family protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
gltP; sodium:dicarboxylate symporter
13_1_40cm_2_scaffold_810_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19057..19998)
DNA (942bp) protein (314aa)
Putative N-acetylglucosamine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A969_GEMAT
putative N-acetylglucosamine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase BadF/BadG/BcrA/BcrD type
13_1_40cm_2_scaffold_810_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19995..21470)
DNA (1476bp) protein (492aa)
Putative sodium/solute symporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A968_GEMAT
putative sodium/solute symporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
SSS sodium solute transporter superfamily
13_1_40cm_2_scaffold_810_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21533..21892)
DNA (360bp) protein (120aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A966_GEMAT
erpA; putative iron-sulfur cluster insertion protein ErpA Tax=GWC2_Gemmatimonadetes_71_10_curated
iron-sulfur cluster assembly accessory protein
13_1_40cm_2_scaffold_810_20
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22012..23751
DNA (1740bp) protein (580aa)
Na+/solute symporter Tax=RBG_16_Ignavibacteria_35_7_curated
Na+/solute symporter
Glr3452 protein id=4555261 bin=GWC2_Methylomirabilis_70_16 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 20 items

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