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13_1_40cm_2_scaffold_8832

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_8832_1
unknown

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1..141
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_2_scaffold_8832_2
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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365..1840
DNA (1476bp) protein (492aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13 5.4.2.8); K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Thaumarchaeota_49_8_curat
mpg1; putative mannose-1-phosphate guanyltransferase (EC:2.7.7.13)
Glucose-1-phosphate nucleotidyltransferase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMX4_CLOPA
13_1_40cm_2_scaffold_8832_3
unknown

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comp(1896..2132)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_2_scaffold_8832_4
RBG_16_Archaea_50_20_curated, Archaea

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comp(2185..2910)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI00036D57CD
tRNA methyltransferase complex GCD14 subunit Tax=RBG_16_Archaea_50_20_curated
tRNA methyltransferase complex GCD14 subunit
13_1_40cm_2_scaffold_8832_5
unknown

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comp(3014..3508)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_2_scaffold_8832_6
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(3604..4188)
DNA (585bp) protein (195aa)
Protein Tpen_0748 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=Y748_THEPD
AMMECR1 domain-containing protein
Protein Tpen_0748 {ECO:0000255|HAMAP-Rule:MF_00645}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk
13_1_40cm_2_scaffold_8832_7
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(4209..4709)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DP39_STAMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN70399.1}; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylothermus mar
13_1_40cm_2_scaffold_8832_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(4706..6061)
DNA (1356bp) protein (452aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrC; Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TTM2_9EURY
13_1_40cm_2_scaffold_8832_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(6036..6623)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI0003636EFA
signal-transduction protein Tax=RBG_16_Archaea_50_20_curated
putative signal-transduction protein
13_1_40cm_2_scaffold_8832_10
RBG_16_Archaea_50_20_curated, Archaea

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6731..7090
DNA (360bp) protein (120aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_8832_11
unknown

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comp(7044..7337)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_2_scaffold_8832_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(7499..8488)
DNA (990bp) protein (330aa)
DNA repair and recombination protein RadA n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU1_9CREN
DNA recombination and repair protein, RecA-like protein Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA repair protein RadA
13_1_40cm_2_scaffold_8832_13
unknown

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8687..8980
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_2_scaffold_8832_14
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

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8981..10348
DNA (1368bp) protein (456aa)
UPI0003D6F7CB related cluster n=1 Tax=unknown RepID=UPI0003D6F7CB
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15707915}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queensl
infB; translation initiation factor IF-2
13_1_40cm_2_scaffold_8832_15
unknown

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10403..11551
DNA (1149bp) protein (383aa)

This feature has no annotations

13_1_40cm_2_scaffold_8832_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(11591..12406)
DNA (816bp) protein (272aa)
Endonuclease NucS n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2L6_9ARCH
hypothetical protein; K07503 hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_2_scaffold_8832_17
Photobacterium angustum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12435..12971
DNA (537bp) protein (179aa)
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581}; Short=Malonyl-ACP O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835};; EC=2.1.1.
Methyltransferase type 11 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9G6_9EURY
methyltransferase type 11
13_1_40cm_2_scaffold_8832_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

13263..13505
DNA (243bp) protein (81aa)
Putative snRNP Sm-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IID4_NITGG
small nuclear ribonucleoprotein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Bathyarchaeota_38_9_curated
putative snRNP Sm-like protein
13_1_40cm_2_scaffold_8832_19
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13507..14073)
DNA (567bp) protein (189aa)
Pyridoxin-like ECF transporter substrate-specific component n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIR2_THEBM
pyridoxin-like ECF transporter substrate-specific component Tax=RBG_16_Bathyarchaeota_48_13_curated
pyridoxin-like ECF transporter substrate-specific component
13_1_40cm_2_scaffold_8832_20
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(14089..14334)
DNA (246bp) protein (82aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227};
CTP synthase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BJX9_9EURY
CTP synthase
Displaying 20 items

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