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13_1_40cm_2_scaffold_854

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_854_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..1013)
DNA (1011bp) protein (337aa)
aminopeptidase (EC:3.4.13.9); K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=GWA2_Rokubacteria_73_35_curated
aminopeptidase (EC:3.4.13.9)
Metallopeptidase family M24 protein id=4827678 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium CSL12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_854_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1028..1903)
DNA (876bp) protein (292aa)
tartronate semialdehyde reductase (EC:1.1.1.60)
Tartronate semialdehyde reductase id=4547685 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Rahnella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
2-hydroxy-3-oxopropionate reductase Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_2_scaffold_854_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1993..3231)
DNA (1239bp) protein (413aa)
Extracellular ligand-binding receptor id=4547691 bin=GWF2_Methylomirabilis_70_14 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor Tax=GWA2_Rokubacteria_70_23_curated
Extracellular ligand-binding receptor
13_1_40cm_2_scaffold_854_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3426..4748
DNA (1323bp) protein (441aa)
UbiD family decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UbiD decarboxylase family protein id=4827625 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiD family decarboxylase
13_1_40cm_2_scaffold_854_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4745..5413
DNA (669bp) protein (223aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627784 bin=bin7_NC10_sister species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_854_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5410..6972)
DNA (1563bp) protein (521aa)
ilvG; acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWC2_Rokubacteria_70_16_curated
Acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase large subunit id=3164071 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_854_7
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7377..9023)
DNA (1647bp) protein (549aa)
AMP-binding enzyme family protein {ECO:0000313|EMBL:EGK12727.1}; EC=6.2.1.- {ECO:0000313|EMBL:EGK12727.1};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Des
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-binding enzyme family protein n=1 Tax=Desmospora sp. 8437 RepID=F5SDZ0_9BACL
13_1_40cm_2_scaffold_854_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9020..10276)
DNA (1257bp) protein (419aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
protein binding protein id=14626651 bin=bin7_NC10_sister species=Dasypus novemcinctus genus=Dasypus taxon_order=Cingulata taxon_class=Mammalia phylum=Chordata tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_854_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10695..11687)
DNA (993bp) protein (331aa)
Putative uncharacterized protein id=2338962 bin=GWA2_Methylomirabilis_73_35 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted dehydrogenases and related proteins Tax=GWA2_Rokubacteria_73_35_curated
glucose-fructose oxidoreductase-like protein
13_1_40cm_2_scaffold_854_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11904..14084
DNA (2181bp) protein (727aa)
PAS/PAC sensor hybrid histidine kinase id=4942499 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS/PAC sensor hybrid histidine kinase Tax=GWC2_Rokubacteria_70_16_curated
multi-sensor hybrid histidine kinase
13_1_40cm_2_scaffold_854_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14081..14467)
DNA (387bp) protein (129aa)
Putative Histidine kinase id=4726950 bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
multi-sensor signal transduction histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
Signal transduction histidine kinase
13_1_40cm_2_scaffold_854_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14547..15683
DNA (1137bp) protein (379aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWC2_Rokubacteria_70_16_curated
acaB_8; acetyl-CoA C-acyltransferase 8 (EC:2.3.1.16)
Propanoyl-CoA C-acyltransferase id=4813972 bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_854_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15676..16056
DNA (381bp) protein (127aa)
hypothetical protein; K07068 Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3677765 bin=GWF2_Methylomirabilis_70_14 species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_854_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16216..17442
DNA (1227bp) protein (409aa)
Putative O-linked N-acetylglucosamine transferase, SPINDLY family id=1325892 bin=GWE1_T_denit_62_9 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative O-linked N-acetylglucosamine transferase, SPINDLY family Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
13_1_40cm_2_scaffold_854_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17439..18794
DNA (1356bp) protein (452aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TPR repeat protein id=4029902 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_854_16
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18962..19423
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1YYH3_PHOPR
Uncharacterized protein {ECO:0000313|EMBL:EAS41349.1}; TaxID=314280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundu
13_1_40cm_2_scaffold_854_17
unknown

Not on your lists

19420..19539
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_40cm_2_scaffold_854_18
unknown

Not on your lists

19568..19846
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_2_scaffold_854_19
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(19843..21930)
DNA (2088bp) protein (696aa)
malQ4; 4-alpha-glucanotransferase (EC:2.4.1.25) Tax=GWC2_Nitrospirae_57_9_curated
Glycogen debranching enzyme n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4C6_GEODF rbh
glycogen debranching protein
13_1_40cm_2_scaffold_854_20
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21972..23888)
DNA (1917bp) protein (639aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucan
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Desulfovibrio sp. U5L RepID=I2PYG6_9DELT rbh
1,4-alpha-glucan branching protein
13_1_40cm_2_scaffold_854_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(23932..26196)
DNA (2265bp) protein (755aa)
carbon monoxide dehydrogenase large subunit CoxL/CutL-like protein (EC:1.2.99.2)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=3729544 bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_2_scaffold_854_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(26362..27621)
DNA (1260bp) protein (420aa)
Phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=GWA2_Rokubacteria_73_35_curated
Phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase id=4585789 bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 22 items

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