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13_1_40cm_2_scaffold_861

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_861_1
unknown

Not on your lists

comp(342..491)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_2_scaffold_861_2
unknown

Not on your lists

693..968
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_2_scaffold_861_3
unknown

Not on your lists

952..1161
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_2_scaffold_861_4
unknown

Not on your lists

comp(1094..2998)
DNA (1905bp) protein (635aa)

This feature has no annotations

13_1_40cm_2_scaffold_861_5

Not on your lists

comp(3397..4521)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Streptomyces acidiscabies RepID=UPI0002894FC9
hypothetical protein
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49051.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_2_scaffold_861_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(5363..6268)
DNA (906bp) protein (302aa)
Signal recognition particle receptor FtsY n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YUP3_THEON
signal recognition particle GTPase Tax=RBG_16_Archaea_50_20_curated
signal recognition particle GTPase
13_1_40cm_2_scaffold_861_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(6261..6668)
DNA (408bp) protein (136aa)
Prefoldin subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDA_METKA
GIM5; prefoldin subunit alpha; K04797 prefoldin alpha subunit Tax=RBG_16_Archaea_50_20_curated
GIM5; prefoldin subunit alpha
13_1_40cm_2_scaffold_861_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(6746..6952)
DNA (207bp) protein (69aa)
50S ribosomal protein L18Ae n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S5Y5_METSF
ribosomal LX protein
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_861_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(7010..7675)
DNA (666bp) protein (222aa)
Translation initiation factor 6 n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8A969_IGNH4
translation initiation factor 6 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor IF-6
13_1_40cm_2_scaffold_861_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(7679..8239)
DNA (561bp) protein (187aa)
50S ribosomal protein L31e n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL31_METKA
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e Tax=RBG_13_Bathyarchaeota_38_9_curated
RPL31A; 50S ribosomal protein L31
13_1_40cm_2_scaffold_861_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(8408..8752)
DNA (345bp) protein (115aa)
DNA-binding protein UNCMA_18240 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Y1824_UNCMA
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
DNA-binding protein
13_1_40cm_2_scaffold_861_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(8745..9203)
DNA (459bp) protein (153aa)
30S ribosomal protein S19e n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9N6_STAHD
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S19e
13_1_40cm_2_scaffold_861_13
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(9300..9626)
DNA (327bp) protein (109aa)
Ribonuclease P protein component 4 {ECO:0000255|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000255|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000255|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000255|H
Ribonuclease P protein component 4 n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=RNP4_THESM
ribonuclease P protein component 4
13_1_40cm_2_scaffold_861_14
unknown

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comp(9751..9957)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_2_scaffold_861_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

10015..10380
DNA (366bp) protein (122aa)
Ribosomal RNA small subunit methyltransferase Nep1 n=1 Tax=uncultured marine crenarchaeote AD1000-23-H12 RepID=B3V6H6_9ARCH
ribosome biogenesis protein; K14568 essential for mitotic growth 1 Tax=RBG_13_Bathyarchaeota_38_9_curated
ribosome biogenesis protein
13_1_40cm_2_scaffold_861_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

10416..10811
DNA (396bp) protein (132aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_861_17
unknown

Not on your lists

10940..11569
DNA (630bp) protein (210aa)

This feature has no annotations

13_1_40cm_2_scaffold_861_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(11553..12500)
DNA (948bp) protein (316aa)
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] id=14425044 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=CSP1_2_Dadabacteria
glycine cleavage system t protein (EC:2.1.2.10)
13_1_40cm_2_scaffold_861_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

12910..13620
DNA (711bp) protein (237aa)
ornithine carbamoyltransferase (EC:2.1.3.3); K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
Ornithine carbamoyltransferase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D509_PELTS
ArgF; ornithine carbamoyltransferase
13_1_40cm_2_scaffold_861_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

13630..14454
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037805C7
hypothetical protein; K09716 hypothetical protein Tax=RBG_16_Archaea_50_20_curated
D-tyrosyl-tRNA(Tyr) deacylase
13_1_40cm_2_scaffold_861_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

14570..14776
DNA (207bp) protein (69aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_861_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


14801..15295
DNA (495bp) protein (165aa)
Transcription elongation factor Spt5 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B924_METTP
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_16_Archaea_50_20_curated
nusG; transcription antitermination protein NusG
13_1_40cm_2_scaffold_861_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


15273..15764
DNA (492bp) protein (164aa)
50S ribosomal protein L11 n=2 Tax=unclassified Thermoplasmatales RepID=M7TUR0_9EURY
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_13_Bathyarchaeota_38_9_curated
rpl11p; 50S ribosomal protein L17
13_1_40cm_2_scaffold_861_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


15777..16439
DNA (663bp) protein (221aa)
50S ribosomal protein L1 n=1 Tax=Methanobacterium sp. MB1 RepID=U6EC15_9EURY
50S ribosomal protein L1 Tax=RBG_16_Archaea_50_20_curated
rpl1p; 50S ribosomal protein L1P
13_1_40cm_2_scaffold_861_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


16444..17316
DNA (873bp) protein (291aa)
50S ribosomal protein L10 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEN6_PYRF1
rpl10p; acidic ribosomal protein P0 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L10
13_1_40cm_2_scaffold_861_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

17378..17680
DNA (303bp) protein (101aa)
50S ribosomal protein L12 n=1 Tax=uncultured archaeon RepID=G3C9F9_9ARCH
rpl12p; 50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 Tax=RBG_16_Archaea_50_20_curated
rpl12p; 50S ribosomal protein L12
13_1_40cm_2_scaffold_861_27
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

17807..20590
DNA (2784bp) protein (928aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Archaea_50_20_curated
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PUH2_METTM rbh
13_1_40cm_2_scaffold_861_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

20591..23515
DNA (2925bp) protein (975aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1237085 species="Archaea; Thaumar
Leucine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH1_NITGG
13_1_40cm_2_scaffold_861_29
unknown

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comp(23516..23704)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_2_scaffold_861_30
unknown

Not on your lists

24131..24316
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying items 1-30 of 53 in total

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