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13_1_40cm_2_scaffold_920

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_920_1
unknown

Not on your lists

comp(3..134)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_2_scaffold_920_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(211..1572)
DNA (1362bp) protein (454aa)
Transcription elongation protein NusA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N6_GEMAT
nusA; transcription elongation protein NusA; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
nusA; transcription elongation protein NusA
13_1_40cm_2_scaffold_920_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1620..2096)
DNA (477bp) protein (159aa)
Ribosome maturation factor RimP n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RIMP_GEMAT
hypothetical protein; K09748 ribosome maturation factor RimP Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_920_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2163..3011)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N4_GEMAT
hypothetical protein; K05810 conserved hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_2_scaffold_920_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2998..4296)
DNA (1299bp) protein (433aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhizobium sp. CF142 RepID=J2L3J3_9RHIZ
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
13_1_40cm_2_scaffold_920_6
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

4366..5604
DNA (1239bp) protein (413aa)
Sodium/hydrogen exchanger n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRI7_CLOPH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
sodium/hydrogen exchanger
13_1_40cm_2_scaffold_920_7
unknown

Not on your lists

5601..6029
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_2_scaffold_920_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

5969..6952
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N1_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phospholipase C/P1 nuclease
13_1_40cm_2_scaffold_920_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6949..8394)
DNA (1446bp) protein (482aa)
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Gem
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N0_GEMAT
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
13_1_40cm_2_scaffold_920_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8391..9788)
DNA (1398bp) protein (466aa)
gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Gem
gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M9_GEMAT
13_1_40cm_2_scaffold_920_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9785..10096)
DNA (312bp) protein (104aa)
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLO
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
13_1_40cm_2_scaffold_920_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10093..12351)
DNA (2259bp) protein (753aa)
ATP-dependent DNA helicase (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M7_GEMAT
13_1_40cm_2_scaffold_920_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12348..13463)
DNA (1116bp) protein (372aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M6_GEMAT
two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
ATP-binding region ATPase domain protein
13_1_40cm_2_scaffold_920_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13495..14787)
DNA (1293bp) protein (431aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SYS_GEMAT
Seryl-tRNA synthetase
13_1_40cm_2_scaffold_920_15
unknown

Not on your lists

comp(14792..14917)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_2_scaffold_920_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15409..15741
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M3_GEMAT
hypothetical protein; K07131 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_920_17
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15835..16188
DNA (354bp) protein (118aa)
chemotaxis protein CheY n=1 Tax=Caldimonas manganoxidans RepID=UPI0003606529
response regulator
Response regulator {ECO:0000313|EMBL:AHM05635.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium elon
13_1_40cm_2_scaffold_920_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16543..17142
DNA (600bp) protein (200aa)
manC; putative mannose-1-phosphate guanylyltransferase (EC:2.7.7.13); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Mannose-1-phosphate guanylyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDV1_9EURY
Nucleotidyl transferase
13_1_40cm_2_scaffold_920_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17139..18308
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type
13_1_40cm_2_scaffold_920_20
unknown

Not on your lists

comp(18775..18891)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_2_scaffold_920_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19418..20176
DNA (759bp) protein (253aa)
putative protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_920_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20181..20657)
DNA (477bp) protein (159aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_920_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20817..22448)
DNA (1632bp) protein (544aa)
60 kDa chaperonin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CH60_GEMAT
groEL; 60 kDa chaperonin; K04077 chaperonin GroEL Tax=GWC2_Gemmatimonadetes_71_10_curated
60 kDa chaperonin
13_1_40cm_2_scaffold_920_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22469..22777)
DNA (309bp) protein (103aa)
10 kDa chaperonin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CH10_GEMAT
groES; 10 kDa chaperonin; K04078 chaperonin GroES Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
10 kDa chaperonin
13_1_40cm_2_scaffold_920_25
unknown

Not on your lists

comp(22909..23328)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_2_scaffold_920_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23329..24279)
DNA (951bp) protein (317aa)
NLP/P60 protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GDN8_9FIRM
cell wall-associated hydrolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
NLP/P60 protein
13_1_40cm_2_scaffold_920_27
unknown

Not on your lists

comp(24302..24586)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_2_scaffold_920_28
unknown

Not on your lists

comp(24604..25251)
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_2_scaffold_920_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25384..26307)
DNA (924bp) protein (308aa)
UbiA prenyltransferase; K04040 chlorophyll synthase [EC:2.5.1.62] Tax=GWC2_Gemmatimonadetes_71_10_curated
UbiA prenyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3A9_9BACT
UbiA prenyltransferase
13_1_40cm_2_scaffold_920_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26304..27083)
DNA (780bp) protein (260aa)
putative transcriptional acitvator, Baf family; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=GWC2_Gemmatimonadetes_71_10_curated
pantothenate kinase n=1 Tax=Meiothermus timidus RepID=UPI000372C9F3
putative Baf family transcriptional acitvator
Displaying items 1-30 of 37 in total

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