ggKbase home page

13_1_40cm_2_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_93_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..339
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN36_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26049.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
13_1_40cm_2_scaffold_93_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(506..1642)
DNA (1137bp) protein (379aa)
Glycosyl transferase, group 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IL79_ANADE
glycosyltransferase Tax=RBG_16_RIF_WS3X_71_46_curated
group 1 glycosyl transferase
13_1_40cm_2_scaffold_93_3
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1662..3077)
DNA (1416bp) protein (472aa)
O-antigen ligase-related protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RDV3_9PLAN
O-antigen ligase-related protein {ECO:0000313|EMBL:EMI17653.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopir
13_1_40cm_2_scaffold_93_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3074..4996)
DNA (1923bp) protein (641aa)
Asparagine synthetase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WM99_9CYAN
asparagine synthase (glutamine-hydrolyzing)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:AHG91041.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_93_5
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4996..6276)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADV9_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
hypothetical protein
13_1_40cm_2_scaffold_93_6
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(6267..7256)
DNA (990bp) protein (330aa)
Glycosyl transferase group 1 n=2 Tax=Rhodothermus marinus RepID=D0MF22_RHOM4
group 1 glycosyl transferase Tax=GWC2_Nitrospirae_57_9_curated
group 1 glycosyl transferase
13_1_40cm_2_scaffold_93_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8003..9106
DNA (1104bp) protein (368aa)
putative succinoglycan biosynthesis protein ExoA (EC:2.4.-.-)
Putative Succinoglycan biosynthesis protein ExoA {ECO:0000313|EMBL:CBK40648.1}; EC=2.4.-.- {ECO:0000313|EMBL:CBK40648.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; N
Putative Succinoglycan biosynthesis protein ExoA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBN9_9BACT
13_1_40cm_2_scaffold_93_8
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9681..11696
DNA (2016bp) protein (672aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI0003A4BFEE
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABX06955.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosip
13_1_40cm_2_scaffold_93_9
unknown

Not on your lists

comp(11606..12043)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_2_scaffold_93_10
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12149..12892
DNA (744bp) protein (248aa)
FAD dependent oxidoreductase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JYC4_DESFR
FAD dependent oxidoreductase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
FAD dependent oxidoreductase
13_1_40cm_2_scaffold_93_11
unknown

Not on your lists

comp(12860..13072)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_2_scaffold_93_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13115..14641)
DNA (1527bp) protein (509aa)
Putative polysaccharide biosynthesis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V2_GEMAT
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AHG90016.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_93_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14793..16115
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003657738
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:ADJ23163.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrifi
13_1_40cm_2_scaffold_93_14
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

16909..17487
DNA (579bp) protein (193aa)
dTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_16_Chloroflexi_47_49_curated
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSP4_9GAMM
13_1_40cm_2_scaffold_93_15
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17484..18779
DNA (1296bp) protein (432aa)
Homoserine dehydrogenase NAD-binding protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7UUI9_DESML rbh
Homoserine dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EPR36033.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;
NAD(P)-dependent oxidoreductase
13_1_40cm_2_scaffold_93_16
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18772..19926
DNA (1155bp) protein (385aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RBG_16_Gamma2_60_9_curated
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00037EC0C3
NAD-dependent epimerase/dehydratase
13_1_40cm_2_scaffold_93_17
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19928..21262
DNA (1335bp) protein (445aa)
GDP-mannose 6-dehydrogenase (EC:1.1.1.132)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000368E65B
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EPR36036.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desu
13_1_40cm_2_scaffold_93_18
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21259..23292
DNA (2034bp) protein (678aa)
polysaccharide pyruvyl transferase (EC:2.-.-.-)
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:ADP97668.1}; EC=2.-.-.- {ECO:0000313|EMBL:ADP97668.1};; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alter
Polysaccharide pyruvyl transferase n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PPY8_MARAH
13_1_40cm_2_scaffold_93_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23433..24296
DNA (864bp) protein (288aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase n=1 Tax=planctomycete KSU-1 RepID=I3INK6_9PLAN
13_1_40cm_2_scaffold_93_20
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

24296..24973
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI0003648CC1
putative LmbE-like protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
putative LmbE-like protein
13_1_40cm_2_scaffold_93_21
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24970..25863
DNA (894bp) protein (298aa)
Glycosyltransferase n=1 Tax=planctomycete KSU-1 RepID=I3INL0_9PLAN
Glycosyltransferase {ECO:0000313|EMBL:GAB63305.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
probable glycosyl transferase
13_1_40cm_2_scaffold_93_22
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

26058..26312
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:CEO90426.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophacetic
Metallophosphoesterase id=2858967 bin=GWA2_Ignavibacteria_55_11 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
calcineurin-like phosphoesterase
13_1_40cm_2_scaffold_93_23
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

26371..26799
DNA (429bp) protein (143aa)
Metallophosphoesterase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G5Q6_CHLAD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACL23767.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus
13_1_40cm_2_scaffold_93_24
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27010..28353
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GVA8_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73454.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
13_1_40cm_2_scaffold_93_25
unknown

Not on your lists

comp(28350..29603)
DNA (1254bp) protein (418aa)

This feature has no annotations

13_1_40cm_2_scaffold_93_26
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

29762..31591
DNA (1830bp) protein (610aa)
Putative carbamoyl transferase; K00612 carbamoyltransferase [EC:2.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Putative carbamoyl transferase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN70_IGNAJ
Carbamoyltransferase
13_1_40cm_2_scaffold_93_27
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

31564..31968
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003666761
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_40cm_2_scaffold_93_28
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

31982..32140
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN68_IGNAJ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_40cm_2_scaffold_93_29
unknown

Not on your lists

32173..33696
DNA (1524bp) protein (508aa)

This feature has no annotations

13_1_40cm_2_scaffold_93_30
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33556..34155)
DNA (600bp) protein (200aa)
S-adenosylmethionine-dependent methyltransferase 1 (EC:2.1.1.-)
Methyltransferase type 11 n=1 Tax=Halobacterium sp. DL1 RepID=G4IDW7_9EURY
SAM-dependent methlyltransferase {ECO:0000313|EMBL:AHG04873.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp
Displaying items 1-30 of 37 in total

View Taxonomy